Notebooks

Showing 1-30 of 164 notebooks
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SARS-CoV-2 global genomic selection (2019-Aug 2023) This notebook is a fork
@spond
Sergei Pond
Aug 13
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PRIME analysis result visualization This notebook is a fork
@spond
Sergei Pond
Jun 9
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HIV-1 gag positional graph
@spond
Sergei Pond
Mar 22
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RER test This notebook is a fork
@spond
Sergei Pond
Mar 7
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SynREV Codon fit to all data This notebook is a fork
@spond
Sergei Pond
Mar 3
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NRM (non-reversible model) analysis result visualization This notebook is a fork
@spond
Sergei Pond
Mar 1
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Plotting MSS (amino-acid) GA model selection results This notebook is a fork
@spond
Sergei Pond
Nov 21, 2022
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BUSTED-MH 4-taxon simulation results
@spond
Sergei Pond
Nov 19, 2022• 1
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Alignment screens with aBSREL This notebook is a fork
@spond
Sergei Pond
Oct 11, 2022
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Evaluate different forms of multiple testing correction. This notebook is a fork
@spond
Sergei Pond
Sep 21, 2022
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BUSTED[S] vs BUSTED[S]-MH This notebook is a fork
@spond
Sergei Pond
Nov 30, 2022
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Plot asymptotic vs empirical LRT distribution
@spond
Sergei Pond
Sep 12, 2022• 2
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ARGOS API/organism
@spond
Sergei Pond
Aug 10, 2022
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MEME analysis result visualization This notebook is a fork
@spond
Sergei Pond
Jul 15, 2022• 1
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Plotting MSS codon-level model results
@spond
Sergei Pond
Jul 12, 2022• 1
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Visualizing MSS model results
@spond
Sergei Pond
Jun 13, 2022
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Compare BUSTED analysis results This notebook is a fork
@spond
Sergei Pond
May 27, 2022
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BUSTED analysis result visualization This notebook is a fork
@spond
Sergei Pond
Dec 1, 2022
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Discrete distribution visualization This notebook is a fork
@spond
Sergei Pond
May 12, 2022• 1
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Visualizing selection analysis results for evolution of WNV
@spond
Sergei Pond
May 2, 2022• 1
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Search + Table This notebook is a fork
@spond
Sergei Pond
Apr 25, 2022
BUSTED[S] vs BUSTED[S]-MH This notebook is a fork
@spond
Sergei Pond
Apr 25, 2022
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Evidence of natural selection history operating on SARS-CoV-2 genomes enabled by… This notebook is a fork
@spond
Sergei Pond
Apr 5, 2022
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Phylotree 1.0.0 -- Unscaled IAV HA colored by host This notebook is a fork
@spond
Sergei Pond
Apr 5, 2022
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SYNREV2
@spond
Sergei Pond
Feb 23, 2022
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mAb neutralization review
@spond
Sergei Pond
Feb 9, 2022• 2
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BUSTED-PH simulations
@spond
Sergei Pond
Feb 8, 2022
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HorseCoV variant data
@spond
Sergei Pond
Jan 19, 2022• 5
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Selection analysis of Omicron S-gene sequences enabled by data from This notebook is a fork
@spond
Sergei Pond
Jan 13, 2022
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Visualizing selection analysis results for evolution of the BA2 sequences This notebook is a fork
@spond
Sergei Pond
Dec 28, 2021
Showing 1-30 of 164 notebooks
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