lorenasandoval’s notebooks | Observable

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lorenasandoval’s notebooks | Observable

lorenasandoval

@lorenasandoval

63

4

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23andMe Ancestry Inference

Oct 27

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2021 Ancestry Inference Papers

Oct 21

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23andMe Chip Classification

Oct 16

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23andMe v2/v3/v4/v5 Overlap

Oct 7

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Extending FastImpute to v2/v3/v4/v5 23andMe Across 1,759 PGS Models

Oct 8

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23andme_v5_imputation_and_ancestry

Sep 24

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Beagle Imputation in Google (cloud run job)

Sep 21

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Preparation of 23andMe files for Imputation

Sep 16

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Duplicate Probes in one v5 build 37 23andMe File (attached)

Aug 26

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23andMeV5 vs Illumina Global Screening Array (GSA)

Aug 10

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Diseasome: PGS/23andme SNP Overlap Analysis (v2–v5)

Oct 16

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23andMe data from PGP

Oct 27

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23andMe Beagle Imputation in Google Cloud

Sep 21

1

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23andMe Imputation Pipeline (Minimac4)

Jul 21

1

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23andme SNP Manifest Chips v2-v5

Oct 16

1

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Polygenic Risk Scores - SDK Examples

Aug 15

1

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23andme Ancestry

Oct 2

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How to Infer Sex from 23andMe Files

Aug 10

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Feb 27

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May 2, 2025

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Feb 21, 2025

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Hierarchical clustering

Sep 25, 2024

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Polygenic Risk Scores - SDK

Jul 23

1

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Correlation-Plot

Sep 16

2

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Jul 3, 2024

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Apr 28

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Jul 8, 2024

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May 31, 2024

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OpenSNP_phenotypes: Site has been deleted 2025

Jul 23

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May 23, 2025

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Simple Dendrogram

Apr 29, 2024

1

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Dendogram Heatmap

Apr 30, 2024

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Hierarchical clustering statPlots.js, tsne, umap

May 26, 2025

2

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Streaming API data into BigQuery

Feb 8, 2024

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Jan 30, 2024

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compare_harmonized_pgs_scores

Jan 24, 2024

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Jul 23, 2024

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Jul 23, 2024

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Oct 5, 2023

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Sep 21, 2023