32:T469,chart_relative_incidence_7d = { const highlighted_index = -1; const dta = relAgeData(inc_params.sum_over, {weight_tests: true}).slice(-74).filter(d=>d.dataPerGroup.all["0-4"] || d.dataPerGroup.all["0-4"]===0); const chrt = create_chart( [10, 250], dta.map(d => ({date: d.date})), { log: true, showXTicks: true, height: width * 7/16 }); const lastPt = age_group_names.map(g => ({ group: g, val: dta[dta.length-2].dataPerGroup.all[g]})).sort((a,b) => a.val - b.val); const lastLookup = {}; lastPt.forEach((p, idx) => { lastLookup[p.group] = idx; }); age_group_names.forEach((g, indx) => { /* if (indx != 1 && indx != 2) { return; }*/ const grpData = dta.map(d => ({date: d.date, value: Math.max(0, d.dataPerGroup.all[g]*inc_params.normalize_pop/7) || NaN})); chrt.line_with_text({ data: grpData, name: g, colour: age_group_colors[indx], opacity: indx == highlighted_index || highlighted_index < 0 ? 1 : 0.3, textpos: 20 * (10 - lastLookup[g]), stroke_width: 2 }); }); return chrt.svg.node(); }33:T650,chart_relative_incidence_short = { const dta = relAgeData(inc_params.sum_over).slice(0); const chrt = create_chart( [0.1,7000], dta.map(d => ({date: d.date})), { log: true, showXTicks: true, height: width * 8/16 }); const lastPt = age_group_names.map(g => ({ group: g, val: dta[dta.length-1].dataPerGroup.all[g]})).sort((a,b) => a.val - b.val); const lastLookup = {}; lastPt.forEach((p, idx) => { lastLookup[p.group] = idx; }); age_group_names.forEach((g, indx) => { //if (indx != 1 && indx != 7) { // return; //} const grpData = dta.map(d => ({date: d.date, value: Math.max(0, d.dataPerGroup.all[g]*inc_params.normalize_pop) || NaN})); chrt.line_with_text({ data: grpData, name: g, colour: age_group_colors[indx], textpos: 15 * (12 - lastLookup[g]) }); }); chrt.line_with_text({ data: dta.map(d => ({date: d.date, value: 0.0001 + d.dso * inc_params.normalize_pop})), name: 'DSO', colour: 'magenta', textoff: -20 }); chrt.line_with_text({ data: dta.map(d => ({date: d.date, value: 0.0001 + d.hosp * inc_params.normalize_pop})), name: 'H', colour: 'darkorange', textoff: 0 }); chrt.line_with_text({ data: dta.map(d => ({date: d.date, value: 0.0001 + d.icu * inc_params.normalize_pop})), name: 'I', colour: 'darkred', textoff: 2 }); chrt.line_with_text({ data: dta.map(d => ({date: d.date, value: Math.abs(d.deceased * inc_params.normalize_pop) || NaN})), name: 'D', colour: 'black', textoff: 1 }); return chrt.svg.node(); }34:T48a,{ const dta = absAgeData(inc_params.sum_over).slice(174); const chrt = create_chart( [2,20000], dta.map(d => ({date: d.date})), { log: true, showXTicks: true, valFormat: '2m' }); const lastPt = age_group_names.map(g => ({ group: g, val: dta[dta.length-1].dataPerGroup.all[g]})).sort((a,b) => a.val - b.val); const lastLookup = {}; lastPt.forEach((p, idx) => { lastLookup[p.group] = idx; }); age_group_names.forEach((g, indx) => { if (indx < 0) { return; } const grpData = dta.map(d => ({date: d.date, value: Math.max(0, d.dataPerGroup.all[g]) || NaN})); chrt.line_with_text({ data: grpData, name: g, colour: age_group_colors[indx], textpos: 25 * (9 - lastLookup[g]) }); }); /* chrt.line_with_text({ data: dta.map(d => ({date: d.date, value: 0.0001 + d.hosp * inc_params.normalize_pop})), name: 'H', colour: 'darkorange', textoff: -5 });*/ chrt.line_with_text({ data: dta.map(d => ({date: d.date, value: Math.abs(d.deceased) || NaN})), name: 'D', colour: 'black', textoff: -5 }); return chrt.svg.node(); }35:T4ac, { const time = abs_params.sum_over; const dta = absAgeData(time).slice(-45); const chrt = create_chart( [0,600], dta.map(d => ({date: d.date})), { log: false, showXTicks: true, height: width*8/16, valFormat: '.3r' }); const lastPt = age_group_names.map(g => ({ group: g, val: 0.0001+dta[dta.length-1].dataPerGroup.all[g]})).sort((a,b) => a.val - b.val); const lastLookup = {}; lastPt.forEach((p, idx) => { lastLookup[p.group] = idx; }); age_group_names.forEach((g, indx) => { if (indx < 0) { return; } const grpData = dta.map(d => ({date: d.date, value: 0.0001+d.dataPerGroup.all[g]/time})); chrt.line_with_text({ data: grpData, name: g, colour: age_group_colors[indx], textpos: 15 * (10 - lastLookup[g]) }) }); /*chrt.line_with_text({ data: dta.map((d, idx) => ({date: d.date, value: d.hosp/time})), name: 'H.in', colour: 'darkorange', textoff: -10 }); chrt.line_with_text({ data: dta.map((d, idx) => ({date: d.date, value: d.icu/time})), name: 'ICU.in', colour: 'darkred', textoff: 0 });*/ return chrt.svg.node(); }36:T4ad,{ const time = abs_params.sum_over; const dta = absAgeData(7).slice(-80); const chrt = create_chart( [0.1,2000], dta.map(d => ({date: d.date})), { log: true, showXTicks: true, height: width*8/16 }); chrt.line_with_text({ data: dta.filter(d => d.confirmed || d.confirmed === 0).map(d => ({date: d.date, value: (+d.confirmed + 0.000001)/time})), name: 'cases', colour: age_group_colors[2], textoff: 1 }); chrt.line_with_text({ data: dta.map(d => ({date: d.date, value: (+d.dso + 0.000001)/time})), name: 'DSO', colour: age_group_colors[7], textoff: 1 }); chrt.line_with_text({ data: dta.map(d => ({date: d.date, value: (+d.hosp + 0.000001)/time})), name: 'H', colour: 'darkorange', textoff: 4 }); chrt.line_with_text({ data: dta.map(d => ({date: d.date, value: (+d.icu + 0.000001)/time})), name: 'IT', colour: 'darkred', textoff: 2 }); chrt.line_with_text({ data: dta.map(d => ({date: d.date, value: (d.deceased + 0.000001)/time})), name: 'D', colour: 'black', textoff: 0 }); return chrt.svg.node(); }37:T535,{ const time = abs_params.sum_over; const dta = absAgeData(time).slice(486); const chrt = create_chart( [5,10000], dta.map(d => ({date: d.date})), { log: true, showXTicks: true, height: width*7/16, valFormat: '.2s' }); const ages1 = ['0-4','5-14','15-24']; chrt.line_with_text({ data: dta.map(d => ({ date: d.date, value: sumprops(d.dataPerGroup.all,ages1)/sum_age_population(ages1)*100000 })), name: '0-24', colour: age_group_colors[0], textpos: 20 }); const ages2 = ['25-34','35-44','45-54','55-64']; chrt.line_with_text({ data: dta.map(d => ({ date: d.date, value: sumprops(d.dataPerGroup.all,ages2)/sum_age_population(ages2)*100000})), name: '25-64', colour: age_group_colors[5], textpos: 60 }); const ages3 = ['65-74', '75-84','85+']; chrt.line_with_text({ data: dta.map(d => ({ date: d.date, value: (sumprops(d.dataPerGroup.all,ages3))/sum_age_population(ages3) *100000})), name: '>65', colour: age_group_colors[7], textpos: 100 }); chrt.line_with_text({ data: dta.map(d => ({ date: d.date, value: d.hosp})), name: 'H', colour:'orange' }); return chrt.svg.node(); }38:T571,{ const time = abs_params.sum_over; const dta = absAgeData(time).slice(7); const chrt = create_chart( [2,5000], dta.map(d => ({date: d.date})), { log: true, showXTicks: true, height: width*7/16, valFormat: '.2s' }); const ages1 = ['0-4','5-14','15-24']; chrt.line_with_text({ data: dta.map(d => ({ date: d.date, value: 0.01+sumprops(d.dataPerGroup.all,ages1)/sum_age_population(ages1)*100000 })), name: '0-24', colour: age_group_colors[0], textpos: 20 }); const ages2 = ['25-34','35-44','45-54','55-64']; chrt.line_with_text({ data: dta.map(d => ({ date: d.date, value: 0.01+sumprops(d.dataPerGroup.all,ages2)/sum_age_population(ages2)*100000})), name: '25-64', colour: age_group_colors[5], textpos: 60 }); const ages3 = ['65-74', '75-84','85+']; chrt.line_with_text({ data: dta.map(d => ({ date: d.date, value: 0.01+(sumprops(d.dataPerGroup.all,ages3))/sum_age_population(ages3) *100000})), name: '>65', colour: age_group_colors[7], textpos: 100 }); /*chrt.line_with_text({ data: dta.map(d => ({ date: d.date, value: d.dso/dso_population.occupant*100000})), name: 'dso', colour: age_group_colors[9] });*/ return chrt.svg.node(); }39:T7c1,{ const time = abs_params.sum_over; const dta = absAgeData(time).slice(0); const chrt = create_chart( [0.1,8000], dta.map(d => ({date: d.date})), { log: true, showXTicks: true, height: width*8/16, valFormat: '.2r' }); /*chrt.line_with_text({ data: dta.map(d => ({ date: d.date, value: Math.max(0.00001, sumprops(d.dataPerGroup.all,['0-4','5-14','15-24'])/time) })), name: '0-24', colour: age_group_colors[1] });*/ chrt.line_with_text({ data: dta.map(d => ({ date: d.date, value: Math.max(0.00001, sumprops(d.dataPerGroup.all,['25-34','35-44','45-54','55-64'])/time) })), name: '25-64', colour: age_group_colors[3] }); chrt.line_with_text({ data: dta.map(d => ({ date: d.date, value: (d.dso || d.dso === 0.0) ? Math.max(0.00001, (sumprops(d.dataPerGroup.all,['65-74','75-84','85+']) - d.dso)/time) : NaN })), name: '>65 !dso', colour: age_group_colors[7] }); chrt.line_with_text({ data: dta.map(d => ({date: d.date, value: 0.00001+d.dso/time})), name: 'dso', colour: age_group_colors[7] });/* chrt.line_with_text({ data: dta.map(d => ({date: d.date, value: 0.00001+d.hosp/time})), name: 'H.in', colour: 'orange' }); chrt.line_with_text({ data: dta.map(d => ({date: d.date, value: 0.00001+d.icu/time})), name: 'ICU.in', colour: 'red' });*/ /*chrt.line_with_text({ data: dta.map(d => ({date: d.date, value: d.hosp_occupied})), name: 'H.active', colour: 'red', textoff: -50 });*/ /*chrt.line_with_text({ data: dta.filter(d => d.deceased_othr || d.deceased_other===0).map(d => ({ date: d.date, value: Math.max(0.001, (d.deceased_othr)/time) })), name: 'D !dso', colour: 'black', textoff: 0 });*/ return chrt.svg.node(); }3a:T429,chart_phase_inc_vs_total = { const dta = relAgeData(7, {weight_tests: true}) .slice(819) .filter(d=>d.dataPerGroup.all["0-4"] || d.dataPerGroup.all["0-4"]===0); const dta0 = dta[0]; const dta1 = dta[dta.length - 1]; const phase_data = dta.map(d => age_group_names.map(ag => ({ x: (d.dataPerGroup.all_todate[ag] - dta0.dataPerGroup.all_todate[ag])*1e5, y: d.dataPerGroup.all[ag]*1e5}))); // return phase_data; return Plot.plot({ marginLeft: 60, width: width, height: 0.5*width, y: { label: "novi/100k (7d povp.)", grid: true, //type: "log", tickFormat: "2m" }, x: { //type: "log", label: "skupaj/100k od 2022-06-01 dalje", grid: true, tickFormat: "2m" }, marks: age_group_names.map((ag, ag_i) => [ Plot.line(phase_data.map(a => a[ag_i]), {x: "x", y: "y", stroke: age_group_colors[ag_i].toString()}), Plot.dot(phase_data.map(a => a[ag_i]).slice(-1),{x: "x", y: "y", stroke: age_group_colors[ag_i].toString(), r: 7}) ] ) }) }3b:T52f,chart_phase_growth_vs_total_last = { const dta = relAgeData(inc_params.sum_over, {weight_tests: true}) .slice(908) .filter(d=>d.dataPerGroup.all["0-4"] || d.dataPerGroup.all["0-4"]===0); const dta0 = dta[0]; const dta1 = dta[dta.length-1]; //return dta0; return Plot.plot({ marginLeft: 60, width: width, height: 0.5*width, y: { label: "Rast", grid: true, tickFormat: "p", domain: [0.9, 2] }, x: { label: "skupaj od 2021-09-01 dalje / zadnja vrednost", grid: true, tickFormat: "2m" }, marks: [...age_group_names.map((ag, ag_i) => [Plot.line(dta.map(d => ({ x: (d.dataPerGroup.all_todate[ag] - dta0.dataPerGroup.all_todate[ag])/dta1.dataPerGroup.all[ag], //x: d.dataPerGroup.all_todate[ag]*1e5, y: Math.pow(d.dataPerGroup.all_growth[ag],4/7)})), {x: "x", y: "y", stroke: age_group_colors[ag_i].toString()}), Plot.dot(dta.slice(-1).map(d => ({ x: (d.dataPerGroup.all_todate[ag] - dta0.dataPerGroup.all_todate[ag])/dta1.dataPerGroup.all[ag], //x: d.dataPerGroup.all_todate[ag]*1e5, y: Math.pow(d.dataPerGroup.all_growth[ag],4/7)})), {x: "x", y: "y", stroke: age_group_colors[ag_i].toString(), r: 7})] ), Plot.ruleY([0]),Plot.ruleY([1]) ] }) }3c:T4d7,chart_phase_growth_vs_total = { const dta = relAgeData(inc_params.sum_over, {weight_tests: true}) .slice(485) .filter(d=>d.dataPerGroup.all["0-4"] || d.dataPerGroup.all["0-4"]===0); const dta0 = dta[0]; //return dta0; return Plot.plot({ marginLeft: 60, width: width, height: 0.5*width, y: { label: "Tedenska rast", grid: true, tickFormat: "p", domain: [0.8, 2] }, x: { label: "skupaj/100k od 2021-07-01 dalje", grid: true, tickFormat: "d" }, marks: [...age_group_names.map((ag, ag_i) => [Plot.line(dta.map(d => ({ x: (d.dataPerGroup.all_todate[ag] - dta0.dataPerGroup.all_todate[ag])*1e5, //x: d.dataPerGroup.all_todate[ag]*1e5, y: Math.pow(d.dataPerGroup.all_growth[ag],3/7)})), {x: "x", y: "y", stroke: age_group_colors[ag_i].toString()}), Plot.dot(dta.slice(-1).map(d => ({ x: (d.dataPerGroup.all_todate[ag] - dta0.dataPerGroup.all_todate[ag])*1e5, //x: d.dataPerGroup.all_todate[ag]*1e5, y: Math.pow(d.dataPerGroup.all_growth[ag],3/7)})), {x: "x", y: "y", stroke: age_group_colors[ag_i].toString(), r: 7})] ), Plot.ruleY([0]),Plot.ruleY([1]) ] }) }3d:T4d0,chart_phase_growth_vs_tot_short = { const dta = relAgeData(4, {weight_tests: true}) .slice(580) .filter(d=>d.dataPerGroup.all["0-4"] || d.dataPerGroup.all["0-4"]===0); const dta0 = dta[0]; //return dta0; return Plot.plot({ marginLeft: 60, width: width, height: 0.5*width, y: { label: "Tedenska rast", grid: true, tickFormat: "p", domain: [-0.2, 4] }, x: { label: "skupaj/100k od "+dta0.date + " dalje", grid: true, tickFormat: "d" }, marks: [...age_group_names.map((ag, ag_i) => [Plot.line(dta.map(d => ({ x: (d.dataPerGroup.all_todate[ag] - dta0.dataPerGroup.all_todate[ag])*1e5, //x: d.dataPerGroup.all_todate[ag]*1e5, y: Math.pow(d.dataPerGroup.all_growth[ag],1)-1})), {x: "x", y: "y", stroke: age_group_colors[ag_i].toString()}), Plot.dot(dta.slice(-1).map(d => ({ x: (d.dataPerGroup.all_todate[ag] - dta0.dataPerGroup.all_todate[ag])*1e5, //x: d.dataPerGroup.all_todate[ag]*1e5, y: Math.pow(d.dataPerGroup.all_growth[ag],1)-1})), {x: "x", y: "y", stroke: age_group_colors[ag_i].toString(), r: 7})] ), Plot.ruleY([0]),Plot.ruleY([-1]) ] }) }3e:T4c7,chart_phase_growth_vs_tot_2022 = { const dta = relAgeData(1, {weight_tests: true}) .slice(733) .filter(d=>d.dataPerGroup.all["0-4"] || d.dataPerGroup.all["0-4"]===0); const dta0 = dta[0]; //return dta0; return Plot.plot({ marginLeft: 60, width: width, height: 0.5*width, y: { label: "Tedenska rast", grid: true, tickFormat: "p", domain: [0, 3] }, x: { label: "skupaj/100k od "+dta0.date + " dalje", grid: true, tickFormat: "d" }, marks: [...age_group_names.map((ag, ag_i) => [Plot.line(dta.map(d => ({ x: (d.dataPerGroup.all_todate[ag] - dta0.dataPerGroup.all_todate[ag])*1e5, //x: d.dataPerGroup.all_todate[ag]*1e5, y: Math.pow(d.dataPerGroup.all_growth[ag],1)})), {x: "x", y: "y", stroke: age_group_colors[ag_i].toString()}), Plot.dot(dta.slice(-1).map(d => ({ x: (d.dataPerGroup.all_todate[ag] - dta0.dataPerGroup.all_todate[ag])*1e5, //x: d.dataPerGroup.all_todate[ag]*1e5, y: Math.pow(d.dataPerGroup.all_growth[ag],1)})), {x: "x", y: "y", stroke: age_group_colors[ag_i].toString(), r: 7})] ), Plot.ruleY([0]),Plot.ruleY([1]) ] }) }3f:T4ad,chart_phase_growth_vs_total_all = { const dta = relAgeData(inc_params.sum_over, {weight_tests: true}) .slice(0) .filter(d=>d.dataPerGroup.all["0-4"] || d.dataPerGroup.all["0-4"]===0); const dta0 = dta[0]; //return dta0; return Plot.plot({ marginLeft: 60, width: width, height: 0.5*width, y: { label: "Tedenska rast", grid: true, tickFormat: "p", domain: [0.5, 6] }, x: { label: "skupaj/100k od 2020-03-04 dalje", grid: true, tickFormat: "d" }, marks: [...age_group_names.map((ag, ag_i) => [Plot.line(dta.map(d => ({ x: (d.dataPerGroup.all_todate[ag] - dta0.dataPerGroup.all_todate[ag])*1e5, //x: d.dataPerGroup.all_todate[ag]*1e5, y: d.dataPerGroup.all_growth[ag]})), {x: "x", y: "y", stroke: age_group_colors[ag_i].toString()}), Plot.dot(dta.slice(-1).map(d => ({ x: (d.dataPerGroup.all_todate[ag] - dta0.dataPerGroup.all_todate[ag])*1e5, //x: d.dataPerGroup.all_todate[ag]*1e5, y: d.dataPerGroup.all_growth[ag]})), {x: "x", y: "y", stroke: age_group_colors[ag_i].toString(), r: 7})] ), Plot.ruleY([0]) ] }) }40:T5fa,create_speed_chart = function(dataFunParam, options) { const dataFuns = Array.isArray(dataFunParam) ? dataFunParam : [dataFunParam]; const dataNames = Array.isArray(options && options.name) ? options.name : [options.name]; const dta = absAgeData(1).slice(options.skip_start || growth_params.skip_start); const range = (options && options.range) || (growth_params.range) || [-0.85, 0.85]; const chartData = dataFuns.map(df => create_speed_data(dta, df, options.smooth)); // return chartData; const chrt = create_chart( range, chartData[0], { valFormat: (idx => d3.format('.00%')(2*idx/(1-idx))), height: (options && options.height) || (growth_params.height) || Math.max(width*0.2, range[1] * 300), ...options } ); chartData.forEach((dataElem, elIdx) => { chrt.line_with_text({ data: dataElem, name: (options && options.name[elIdx]) || '', colour: (options && options.colour[elIdx]) || 'black', stroke_width: (options && options.stroke_width) || 2, textpos: 25 * (1 + elIdx) }); }); chrt.line_with_text({ data: [{date: chrt.xScale.domain()[0], value: 1},{date: chrt.xScale.domain()[1], value:1}], name: '', colour: '#bbb', textoff: -1000 }); chrt.line_with_text({ data: [{date: chrt.xScale.domain()[0], value: 0.0001},{date: chrt.xScale.domain()[1], value:0.0001}], name: '', colour: '#222', textoff: -1000 }); return chrt.svg.node(); }41:Td80,create_chart = function(range, data, config) { const log = config && config.log; const height = ((config && config.height) || (0.5 * width)) + ((config && config.showXTicks) ? 25 : 0); const valFormat = (config && config.valFormat) || '.2r'; const valFun = (typeof valFormat === 'string' || valFormat instanceof String) ? d3.format(valFormat) : valFormat; const margin = { top: 5, right: 110, bottom: (config && config.showXTicks) ? 25 : 1, left: 50 }; const first_date = data[0].date; const last_date = data[data.length-1].date;//d3.timeDay.offset(new Date()/*data[data.length-1].date*/,1); if (log && range[0]==0) { range[0] = 0.001; } const xScale = d3.scaleTime() .domain([first_date, last_date]).range([margin.left, width - margin.right]); const yScale = (config && config.log ? d3.scaleLog() : d3.scaleLinear()) .domain([range[0], range[1]]).range([height - margin.bottom, margin.top]); const xAxis = (g) => g .attr('transform', `translate(0,${height - margin.bottom})`) /*.style("font-size", "40")*/ .call(d3.axisBottom(xScale)) .call(g => g.select(".domain").remove()); const yAxis = (g) => g .attr('transform', `translate(${margin.left},0)`) .call(d3.axisLeft(yScale).ticks(Math.ceil(height/20)).tickFormat(valFun)) .call(g => g.select(".domain").remove()); const line = d3.line() .defined(d => d.value != null && !isNaN(d.value) && (!!config || !config.log || d.value > 0) && !(d.sig > 0.4) ) .x(d => xScale(d.date)) .y(d => yScale(d.value)); // Create an empty SVG with specified width and height. const svg = d3.select(DOM.svg(width, height)); const xGrid = (g) => g .attr('stroke', '#eee') .selectAll('line') .data(xScale.ticks()) .join('line') .attr('x1', d => xScale(d)) .attr('x2', d => xScale(d)) .attr('y1', margin.top) .attr('y2', height - margin.bottom); const yGrid = (g) => g .attr('stroke', '#eee') .selectAll('line') .data(yScale.ticks(Math.ceil(height/30))) .join('line') .attr('x1', margin.left) .attr('x2', width - margin.right) .attr('y1', d => yScale(d)) .attr('y2', d => yScale(d)) svg.append('g').call(xGrid); svg.append('g').call(yGrid); // Draw the x and y axes. if (config && config.showXTicks) { svg.append('g').call(xAxis); } svg.append('g').call(yAxis); const last_x = xScale(last_date); const line_with_text = function (c) { const data_clean = c.data.filter(d => (d.value || d.value === 0)) // Draw the line. svg.append('path') .attr("fill", "none") .attr("stroke", (c.colour || 'black')) .attr("opacity", (c.opacity || '100%')) .attr("stroke-width", (c.stroke_width || '1')) .datum(data_clean) .attr('d', line); const last_val = data_clean[data_clean.length-1].value; const textPos = (c.textpos || c.textpos===0) ? c.textpos : yScale(last_val + (c.textoff ? c.textoff - 0.005 : -0.005)); svg.append("text") .attr('x', last_x+10) .attr('y', textPos) .attr('text-anchor', 'start') .attr('fill', c.colour) .attr('opacity', (c.opacity || '100%')) .style('font-size', '16px') .text(c.name + ": " + valFun(last_val)); } return {svg, line, xScale, yScale, last_x, line_with_text}; }42:T70d,absAgeData = function(offset) { return stats.map((day, indx, arr) => ({ date: day['date'] || NaN, dso: day['cases.rh.occupant.confirmed.todate'] || NaN, hosp: day['state.in_hospital.todate'] || NaN, hosp_out: day['state.out_of_hospital.todate'] || NaN, hosp_active: day['state.in_hospital'] || NaN, icu: day['state.icu.todate'] || NaN, deceased: day['state.deceased.todate'] || NaN, deceased_dso: day['deceased.rhoccupant.todate'] || NaN, deceased_othr: day['deceased.other.todate'] || NaN, confirmed: day['cases.confirmed.todate'] || NaN, dataPerGroup: ({ male: fetchAges(day, 'age.male.', null), female: fetchAges(day, 'age.female.', null), all: fetchAges(day, 'age.', null) }) })).map((day, indx, arr) => { if (indx < offset) { return null; } const day1 = arr[indx-offset]; return { date: day.date,//arr[indx-Math.floor(offset/2)].date, dso: day.dso && (7 * absAgg(arr, 'dso', indx, offset)), hosp: day.hosp && 7 * absAgg(arr, 'hosp', indx, offset), hosp_out: day.hosp_out && 7 * absAgg(arr, 'hosp_out', indx, offset), hosp_occupied: day.hosp_active || null, icu: day.icu && 7 * absAgg(arr, 'icu', indx, offset), deceased: day.deceased ? (7 * absAgg(arr, 'deceased', indx, offset)) : NaN, deceased_dso: day.deceased_dso ? (7 * absAgg(arr, 'deceased_dso', indx, offset)) : NaN, deceased_othr: day.deceased_othr ? (7 * absAgg(arr, 'deceased_othr', indx, offset)) : NaN, confirmed: day.confirmed && 7 * absAgg(arr, 'confirmed', indx, offset), dataPerGroup: { male: diffProps(day.dataPerGroup.male, day1.dataPerGroup.male), female: diffProps(day.dataPerGroup.female, day1.dataPerGroup.female), all: diffProps(day.dataPerGroup.all, day1.dataPerGroup.all) } } }).filter(a => a != null); }43:T692,relAgeData = function(offset = 7) { return stats.map(day => ({ date: day['date'], confirmed: day['cases.confirmed.todate'], dso: day['cases.rh.occupant.confirmed.todate'], hosp: day['state.in_hospital.todate'], icu: day['state.icu.todate'], deceased: day['state.deceased.todate'], dataPerGroup: ({ male: fetchAges(day, 'age.male.', 'male'), female: fetchAges(day, 'age.female.', 'female'), all: fetchAges(day, 'age.', 'population') }) })).map((day, indx, arr) => { if (indx < offset) { return null; } const day1 = arr[indx-offset]; const dayW = arr[indx-7]; const dayW1 = arr[indx-offset-7]; const vacc = vax_age_csv[indx - 307]; const cases1 = diffProps(day.dataPerGroup.all, day1.dataPerGroup.all); const casesW = (dayW && dayW1) ? diffProps(dayW.dataPerGroup.all, dayW1.dataPerGroup.all) : null; return { date: day.date,//arr[indx-Math.floor(offset/2)].date, confirmed: (day.confirmed - day1.confirmed)/age_groups.population.population, dso: (day.dso - day1.dso)/dso_population.occupant, hosp: (day.hosp - day1.hosp)/age_groups.population.population, icu: (day.icu - day1.icu)/age_groups.population.population, deceased: (day.deceased - day1.deceased)/age_groups.population.population, dataPerGroup: { male: diffProps(day.dataPerGroup.male, day1.dataPerGroup.male), female: diffProps(day.dataPerGroup.female, day1.dataPerGroup.female), all: cases1, all_todate: day.dataPerGroup.all, all_growth: divProps(cases1, casesW), vacc_1_todate: extract_vax_groups(vacc, "1st"), vacc_2_todate: extract_vax_groups(vacc, "2nd") } } }).filter(a => a != null); }44:T651,//ECDC attack_rates = [ { group: '0-9', hosp_rate: { all: {value: 5.1, ci95: [4.8,5.3]}, female: {value: 4.7, ci95: [4.4,5.0]}, male: {value: 5.4, ci95: [5.1,5.8]} } }, {group: '10-19', hosp_rate: { all: {value: 1.8, ci95: [1.7,1.9]}, female: {value: 1.7, ci95: [1.6,1.8]}, male: {value: 1.9, ci95: [1.8,2.0]} } }, {group: '20-29', hosp_rate: { all: {value: 3.0, ci95: [ 2.9, 3.1]}, female: {value: 3.1, ci95: [ 3, 3.2]}, male: {value: 2.9, ci95: [2.8, 3.0]} } }, {group: '30-39', hosp_rate: { all: {value: 5.6, ci95: [ 5.4, 5.7]}, female: {value: 5.2, ci95: [5.0, 5.3]}, male: {value: 6.0, ci95: [5.8, 6.1]} } }, {group: '40-49', hosp_rate: { all: {value: 9.0, ci95: [ 8.8, 9.1]}, female: {value: 6.9, ci95: [6.7,7]}, male: {value: 11.5, ci95: [11.2,11.7]} } }, {group: '50-59', hosp_rate: { all: {value: 14.3, ci95: [14.1, 14.4]}, female: {value: 10.3, ci95: [10.1, 10.5]}, male: {value: 18.7, ci95: [18.5, 19]} } }, {group: '60-69', hosp_rate: { all: {value: 27.5, ci95: [27.2, 27.8]}, female: {value: 21, ci95: [20.7, 21.4]}, male: {value: 33.1, ci95: [32.7, 33.5]} } }, {group: '70-79', hosp_rate: { all: {value: 45.4, ci95: [45.1, 45.7]}, female: {value: 38.5, ci95: [38, 39]}, male: {value: 51.4, ci95: [51, 51.9]} } }, {group: '80+', hosp_rate: { all: {value: 39.3, ci95: [39.0, 39.5]}, female: {value: 32.7, ci95: [32.3, 33]}, male: {value: 51.3, ci95: [50.8, 51.8]} } } ]45:[] 30:{"title":"Incidenca po starostnih skupinah","cells":[{"id":1738,"value":"md`# Incidenca po starostnih skupinah`","pinned":false,"hidden":false,"mode":"ojs"},{"id":1744,"value":" md`sledilnik.org`","pinned":false,"hidden":false,"mode":"ojs"},{"id":2558,"value":"md`Datum zadnjega podatka: ${d3.timeFormat('%Y-%m-%d')(stats[stats.length-1].date)}`","pinned":false,"hidden":false,"mode":"ojs"},{"id":0,"value":"md`### Relativna incidenca (${inc_params.sum_over}d povprečje / ${inc_params.normalize_pop/1000}k preb.)\n(c) sledilnik.org | _Podatki do:_ ${d3.timeFormat('%Y-%m-%d')(stats.filter(d=>d[\"age.0-4.todate\"]).slice(-1)[0].date)}`","pinned":false,"hidden":false,"mode":"ojs"},{"id":16,"value":"$32","pinned":false,"hidden":false,"mode":"ojs"},{"id":4971,"value":"chart_relative_incidence_7d_lin = {\n const dta = relAgeData(inc_params.sum_over, {weight_tests: true}).slice(-30).filter(d=>d.dataPerGroup.all[\"0-4\"] || d.dataPerGroup.all[\"0-4\"]===0);\n const chrt = create_chart(\n [20,200],\n dta.map(d => ({date: d.date})),\n {\n log: true,\n showXTicks: true,\n height: width * 7/16\n \n });\n const lastPt = age_group_names.map(g => ({ group: g, val: dta[dta.length-2].dataPerGroup.all[g]})).sort((a,b) => a.val - b.val);\n const lastLookup = {};\n lastPt.forEach((p, idx) => {\n lastLookup[p.group] = idx;\n });\n \n age_group_names.forEach((g, indx) => {\n /* if (indx != 1 && indx != 2) {\n return;\n }*/\n const grpData = dta.map(d => ({date: d.date, value: Math.max(0, d.dataPerGroup.all[g]*inc_params.normalize_pop/7) || NaN})); \n chrt.line_with_text({\n data: grpData,\n name: g,\n colour: age_group_colors[indx],\n textpos: 20 * (10 - lastLookup[g]),\n stroke_width: 2\n });\n });\n return chrt.svg.node();\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":3266,"value":"md`## Tedenska rast`","pinned":false,"hidden":false,"mode":"ojs"},{"id":2116,"value":"md`brez glajenja
${\ncreate_speed_chart([\n d => d.dataPerGroup.all[\"0-4\"] + d.dataPerGroup.all[\"5-14\"] + d.dataPerGroup.all[\"15-24\"],\n d => d.dataPerGroup.all[\"25-34\"] + d.dataPerGroup.all[\"35-44\"] + d.dataPerGroup.all[\"45-54\"] + d.dataPerGroup.all[\"55-64\"],\n d => d.dataPerGroup.all[\"65-74\"]+d.dataPerGroup.all[\"75-84\"]+d.dataPerGroup.all[\"85+\"],\n d => (d.confirmed || d.confirmed===0) ? d.confirmed : NaN\n ], {showXTicks: true, name: ['0-24','25-64','65+', 'vsi'], height:width*6/16, colour: [age_group_colors[0], age_group_colors[3], age_group_colors[7], 'darkgray'], stroke_width: \"3\", smooth: 0,\n range:[-0.25,0.5]})\n}`","pinned":false,"hidden":false,"mode":"ojs"},{"id":4685,"value":"md`5d glajenje
${\nspeedChart([0,1,2,3,4,5,6,7,8,9], {\n stroke_width: 2, height: width * 5.75/16, range: [-0.45,0.7],\n smooth: 5, showXTicks: true})\n}`","pinned":false,"hidden":false,"mode":"ojs"},{"id":5127,"value":"md`brez glajenja
${\ncreate_speed_chart(\n [d => (d.confirmed || d.confirmed===0) ? d.confirmed : NaN],\n {showXTicks: true, name: [/*'0-24','25-64','65+',*/ 'vsi'], height:width*6/16, colour: [/*age_group_colors[0], age_group_colors[3], age_group_colors[7],*/ 'dimgray'], stroke_width: \"1.2\", smooth: 0, skip_start: 1, range: [-0.9,0.9]})\n}`","pinned":false,"hidden":false,"mode":"ojs"},{"id":5448,"value":"md`brez glajenja
${\ncreate_speed_chart(\n [d => (d.confirmed || d.confirmed===0) ? d.confirmed : NaN],\n {showXTicks: true, name: [/*'0-24','25-64','65+',*/ 'vsi'], height:width*6/16, colour: [/*age_group_colors[0], age_group_colors[3], age_group_colors[7],*/ 'dimgray'], stroke_width: \"1.2\", smooth: 0, skip_start: 454, range: [-0.55,0.75]})\n}`","pinned":false,"hidden":false,"mode":"ojs"},{"id":5547,"value":"md`21d glajenje
${\ncreate_speed_chart(\n [d => (d.confirmed || d.confirmed===0) ? d.confirmed : NaN],\n {showXTicks: true, name: [/*'0-24','25-64','65+',*/ 'vsi'], height:width*6/16, colour: [/*age_group_colors[0], age_group_colors[3], age_group_colors[7],*/ 'dimgray'], stroke_width: \"1.2\", smooth: 3, skip_start: 1, range: [-0.52,0.55]})\n}`","pinned":false,"hidden":false,"mode":"ojs"},{"id":1207,"value":"inc_params=({\n sum_over: 7,\n normalize_pop: 100000\n});","pinned":false,"hidden":false,"mode":"ojs"},{"id":3567,"value":"md`### Relativna incidenca (${inc_params.sum_over}d vsota / ${inc_params.normalize_pop/1000}k preb)\n(c) sledilnik.org | _Podatki NIJZ in MZ do_: ${d3.timeFormat('%Y-%m-%d')(stats[stats.length-1].date)}`","pinned":false,"hidden":false,"mode":"ojs"},{"id":3561,"value":"$33","pinned":false,"hidden":false,"mode":"ojs"},{"id":1685,"value":"md`### 7d vsota primerov - starostne skupine in smrti\n(c) sledilnik.org`","pinned":false,"hidden":false,"mode":"ojs"},{"id":1691,"value":"$34","pinned":false,"hidden":false,"mode":"ojs"},{"id":618,"value":"md`## Absolutno število primerov (${abs_params.sum_over}d povprečje)`","pinned":false,"hidden":false,"mode":"ojs"},{"id":3132,"value":"$35","pinned":false,"hidden":false,"mode":"ojs"},{"id":3133,"value":"$36","pinned":false,"hidden":false,"mode":"ojs"},{"id":1214,"value":"abs_params=({sum_over: 7})","pinned":false,"hidden":false,"mode":"ojs"},{"id":1116,"value":"growth_params = ({smth: 0, ratio_dif: 7, skip_start: -70, height: 300, range: [-0.6, 0.5], abs_growth:false})","pinned":false,"hidden":false,"mode":"ojs"},{"id":466,"value":"md`## Relativna rast primerov na teden (${\n growth_params.smth\n ? ((growth_params.smth + growth_params.ratio_dif - 7) + \"d glajenje\")\n : \"brez glajenja\"\n})`","pinned":false,"hidden":false,"mode":"ojs"},{"id":327,"value":"speedChart([0,1,2])","pinned":false,"hidden":false,"mode":"ojs"},{"id":373,"value":"speedChart([3,4,5,6])","pinned":false,"hidden":false,"mode":"ojs"},{"id":391,"value":"\nspeedChart([7,8,9], {showXTicks: true})","pinned":false,"hidden":false,"mode":"ojs"},{"id":679,"value":"md`H, ICU, D, dso: 3d glajenje
${\ncreate_speed_chart([d => d.hosp, /*d => d.hosp_out,*/ d => d.deceased, d => d.icu, d=> d.dso], {\n showXTicks: true,\n name: ['Hi',/*'Ho',*/'D','ICU','dso'],\n colour: ['darkorange',/*'green',*/'#555', 'red', age_group_colors[7]],\n smooth: 3,\n range: [-0.85,0.85]\n})\n}`","pinned":false,"hidden":false,"mode":"ojs"},{"id":5469,"value":"md`H, 24-65, 65+: 7d glajenje
${\ncreate_speed_chart([d => d.hosp, d => d.dataPerGroup.all[\"25-34\"] + d.dataPerGroup.all[\"35-44\"] + d.dataPerGroup.all[\"45-54\"] + d.dataPerGroup.all[\"55-64\"],\n d => d.dataPerGroup.all[\"65-74\"]+d.dataPerGroup.all[\"75-84\"]+d.dataPerGroup.all[\"85+\"]], {\n showXTicks: true,\n name: ['Hi','25-64','65+'],\n colour: ['darkorange', age_group_colors[3], age_group_colors[7]],\n smooth: 7,\n range: [-0.9,0.9],\n skip_start: 3\n})\n}`","pinned":false,"hidden":false,"mode":"ojs"},{"id":5579,"value":"md`H, 24-65, 65+: 7d glajenje
${\ncreate_speed_chart([d => d.hosp, d => d.dataPerGroup.all[\"25-34\"] + d.dataPerGroup.all[\"35-44\"] + d.dataPerGroup.all[\"45-54\"] + d.dataPerGroup.all[\"55-64\"],\n d => d.dataPerGroup.all[\"65-74\"]+d.dataPerGroup.all[\"75-84\"]+d.dataPerGroup.all[\"85+\"]], {\n showXTicks: true,\n name: ['Hi','25-64','65+'],\n colour: ['darkorange', age_group_colors[3], age_group_colors[7]],\n smooth: 5,\n range: [-0.5,0.75],\n skip_start: 470\n})\n}`","pinned":false,"hidden":false,"mode":"ojs"},{"id":5598,"value":"md`H, 65-74, 75-84, 85+: 5d glajenje
${\ncreate_speed_chart([\n d => d.hosp,\n d => d.dataPerGroup.all[\"25-34\"] +\n d.dataPerGroup.all[\"35-44\"] +\n d.dataPerGroup.all[\"45-54\"] + d.dataPerGroup.all[\"55-64\"],\n d => d.dataPerGroup.all[\"65-74\"],\n d => d.dataPerGroup.all[\"75-84\"],\n d => d.dataPerGroup.all[\"85+\"]], {\n showXTicks: true,\n name: ['Hi','25-64','65-74','75-84','85+'],\n colour: ['darkorange', age_group_colors[3], age_group_colors[7], age_group_colors[8], age_group_colors[9]],\n smooth: 5,\n range: [-0.5,0.75],\n skip_start: 470\n})\n}`","pinned":false,"hidden":false,"mode":"ojs"},{"id":181,"value":"speedChart = function(ageGroupIndexes, options) {\n const gs = ageGroupIndexes.map(idx => age_group_names[idx]);\n const clrs = ageGroupIndexes.map(idx => age_group_colors[idx]);\n return create_speed_chart(gs.map(g => (d => d.dataPerGroup.all[g])), { ...options, colour:clrs, name: gs});\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":2442,"value":"dso_ratios = ['65-74','75-84','85+'].map(p => dso_population['occupant.'+p+'.share']);","pinned":false,"hidden":false,"mode":"ojs"},{"id":3252,"value":"md`### Relativna incidenca (${inc_params.sum_over}d vsota / ${inc_params.normalize_pop/1000}k preb)`","pinned":false,"hidden":false,"mode":"ojs"},{"id":2374,"value":"$37","pinned":false,"hidden":false,"mode":"ojs"},{"id":5314,"value":"$38","pinned":false,"hidden":false,"mode":"ojs"},{"id":3812,"value":"md`### Relativna incidenca (${inc_params.sum_over}d vsota / ${inc_params.normalize_pop/1000}k preb)`","pinned":false,"hidden":false,"mode":"ojs"},{"id":2603,"value":"{\n const dta = relAgeData(7).slice(0);\n const chrt = create_chart(\n [4,10000],\n dta.map(d => ({date: d.date})),\n {\n log: true,\n showXTicks: true,\n valFormat: '.2r',\n height: width*8/19\n });\n age_group_names.forEach((g, indx) => {\n if (indx > 2) {\n return;\n }\n const grpData = dta.map(d => ({date: d.date, value: Math.max(0, d.dataPerGroup.all[g]*inc_params.normalize_pop) || NaN})); \n chrt.line_with_text({\n data: grpData,\n name: g,\n colour: age_group_colors[indx],\n textpos: 20 + 35*indx\n //,\n //textpos: 0//13 * (1 - lastLookup[g])\n });\n }); \n return chrt.svg.node();\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":2854,"value":"md`## Absolutno število primerov (${abs_params.sum_over}d glajenje)`","pinned":false,"hidden":false,"mode":"ojs"},{"id":2714,"value":"$39","pinned":false,"hidden":false,"mode":"ojs"},{"id":3784,"value":"{\n const time = 7;//abs_params.sum_over;\n const dta = absAgeData(time).slice(0).filter(d => d.deceased_dso > 0);\n const chrt = create_chart(\n [0.05,220],\n dta.map(d => ({date: d.date})),\n {\n log: true,\n showXTicks: true,\n height: width*8/16,\n valFormat: '.2r'\n });\n chrt.line_with_text({\n data: dta.map(d => ({\n date: d.date,\n value: 0.00001+d.dso/time\n })),\n name: 'DSO',\n colour: age_group_colors[9]\n });\n chrt.line_with_text({\n data: dta.filter(d => d.deceased_dso).map(d => ({\n date: d.date,\n value: Math.max(0.005, (d.deceased_dso)/time)\n })),\n name: 'D dso',\n colour: 'black',\n textoff: 2\n });\n return chrt.svg.node();\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":4824,"value":"md`## Fazni diagram — novi vs. skupaj`","pinned":false,"hidden":false,"mode":"ojs"},{"id":5215,"value":"md`Od 2022-06-01 dalje`","pinned":false,"hidden":false,"mode":"ojs"},{"id":4823,"value":"$3a","pinned":false,"hidden":false,"mode":"ojs"},{"id":5218,"value":"md`Od začetka`","pinned":false,"hidden":false,"mode":"ojs"},{"id":4961,"value":"chart_phase_inc_vs_total_full = {\n const dta = relAgeData(inc_params.sum_over, {weight_tests: true})\n .slice(0)\n .filter(d=>d.dataPerGroup.all[\"0-4\"] || d.dataPerGroup.all[\"0-4\"]===0);\n const dta0 = dta[0];\n //return dta0;\n \n return Plot.plot({\n marginLeft: 60,\n marginBottom: 30,\n width: width,\n height: 0.5*width,\n y: {\n label: \"novi/100k (7d povp.)\",\n grid: true,\n tickFormat: \"d\"\n },\n x: {\n label: \"skupaj/100k\",\n grid: true,\n tickFormat: \"d\"\n },\n marks: age_group_names.map((ag, ag_i) => [\n Plot.line(dta.map(d => ({\n x: d.dataPerGroup.all_todate[ag]*1e5,\n y: d.dataPerGroup.all[ag]*1e5/7})),\n {x: \"x\", y: \"y\", stroke: age_group_colors[ag_i].toString()}),\n Plot.dot(dta.slice(-1).map(d => ({\n x: d.dataPerGroup.all_todate[ag]*1e5,\n y: d.dataPerGroup.all[ag]*1e5/7})),\n {x: \"x\", y: \"y\", stroke: age_group_colors[ag_i].toString(), r: 7}),\n ]\n )\n })\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":4935,"value":"md`## Fazni diagram — rast vs. skupaj`","pinned":false,"hidden":false,"mode":"ojs"},{"id":5674,"value":"$3b","pinned":false,"hidden":false,"mode":"ojs"},{"id":5204,"value":"md`Od 2021-07-21 dalje`","pinned":false,"hidden":false,"mode":"ojs"},{"id":4932,"value":"$3c","pinned":false,"hidden":false,"mode":"ojs"},{"id":5212,"value":"md`Od 2021-10-03 dalje`","pinned":false,"hidden":false,"mode":"ojs"},{"id":5102,"value":"$3d","pinned":false,"hidden":false,"mode":"ojs"},{"id":5602,"value":"$3e","pinned":false,"hidden":false,"mode":"ojs"},{"id":5207,"value":"md`Od začetka`","pinned":false,"hidden":false,"mode":"ojs"},{"id":5035,"value":"$3f","pinned":false,"hidden":false,"mode":"ojs"},{"id":3223,"value":"function sum_age_population(props) {\n return d3.sum(props.map(p => age_groups[p].population));\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":2384,"value":"function sumprops(obj, props) {\n const vals = props.map(p => obj[p]).filter(v => (v || v===0));\n if (vals.length < props.length) {\n return NaN;\n }\n return d3.sum(vals);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":671,"value":"$40","pinned":false,"hidden":false,"mode":"ojs"},{"id":943,"value":"create_speed_data = function(data, fun, smth = growth_params.smth, ratioDif = growth_params.ratio_dif, absGrowth = growth_params.abs_growth) {\n const extracted = data.map((d, idx, arr) => {\n return ({date: d.date, value: fun(d, idx, arr)});\n }).filter(d => (d.value || d.value === 0));\n const filled_zeros = fill_zeros(extracted);\n const smoothed = smoothen_data(filled_zeros, smth);\n if (absGrowth) {\n return compute_abs_growth(smoothed, ratioDif);\n }\n return compute_ratio(smoothed, ratioDif);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":949,"value":"fill_zeros = function(data) {\n const ltr = fill_zeros_ltr(data);\n return fill_zeros_ltr(ltr.reverse()).reverse();\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":953,"value":"fill_zeros_ltr = function(data) {\n let acc = 0;\n return data.map(a => {\n if (!(a.value || a.value===0)) {\n return ({});\n }\n acc = acc ? (acc * 0.01 + 0.99 * a.value) : a.value;\n return ({\n date: a.date,\n value: acc\n });\n }).filter(a => a.date);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":3844,"value":"function minusOrNull(a, b) {\n return (a || a === 0) && (a || b === 0) ? a - b : NaN;\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":4820,"value":"function divOrNull(a, b) {\n return (a || a === 0) && b? a / b : NaN;\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":945,"value":"smoothen_data = function(data, smth) {\n return data.map((a, idx, arr) => {\n const startIdx = idx - smth;\n const endIdx = idx;\n if (startIdx < 0 || endIdx >= arr.length) {\n return null;\n }\n let agg = 1;\n let cnt = 0;\n for (let ii = startIdx; ii <= endIdx; ii++) {\n if (arr[ii].value || arr[ii].value===0) {\n agg = agg * arr[ii].value;\n cnt += 1;\n }\n }\n return ({\n date: a.date,\n value: Math.pow(agg, 1.0/cnt)\n })\n }).filter(a => a != null);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":979,"value":"compute_ratio = function(data, distance) {\n const off = distance;\n return data.slice(off).map((a, idx) => {\n const dateIdx = idx + Math.ceil(off/2);\n const val0 = Math.pow(a.value, 7 / off);\n const val1 = Math.pow(data[idx].value, 7 / off);\n\n const val0Sq = val0*val0;\n const val0SigSq = val0;\n const val1Sq = val1*val1;\n const val1SigSq = val1;\n const valSum = val0 + val1;\n \n return ({\n date: a.date,//data[dateIdx].date,\n value: (val0 + val1) ? (val0 - val1) / (val0 + val1) : 0,\n sig: Math.sqrt(val0Sq*val1SigSq+val1Sq*val0SigSq)/(valSum*valSum)\n });\n });\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":3312,"value":"compute_abs_growth = function(data, distance) {\n const off = distance;\n return data.slice(off).map((a, idx) => {\n const dateIdx = idx + off;\n const val0 = Math.pow(a.value, 7 / off);\n const val1 = Math.pow(data[idx].value, 7 / off);\n\n const val0Sq = val0*val0;\n const val1Sq = val1*val1;\n \n return ({\n date: data[dateIdx].date,\n value: (val0 - val1),\n sig: 1\n });\n });\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":14,"value":"$41","pinned":false,"hidden":false,"mode":"ojs"},{"id":585,"value":"$42","pinned":false,"hidden":false,"mode":"ojs"},{"id":3932,"value":"function absAgg(arr, propOrFun, index, len) {\n let cnt = 0;\n let prod = 1.0;\n const f = (typeof propOrFun === 'function') ? propOrFun : (a => a[propOrFun]);\n for (let i = Math.max(1, index - len + 1); i <= index; i++) {\n const val = (f(arr[i]) ? f(arr[i]) : NaN) - (f(arr[i-1]) ? f(arr[i-1]) : NaN);\n if (val > 0 || val === 0) {\n cnt++;\n prod = prod * (val + 0.1);\n }\n }\n return cnt ? (Math.pow(prod, 1.0/cnt)-0.1) : NaN;\n} ","pinned":false,"hidden":false,"mode":"ojs"},{"id":2351,"value":"import {dso_population, data_daily, vax_age_csv} from '@mkadunc/sledilnik-data'","pinned":false,"hidden":false,"mode":"ojs"},{"id":8,"value":"stats = data_daily;//.filter(row => row['age.todate']===0 || row['age.todate']>0);","pinned":false,"hidden":false,"mode":"ojs"},{"id":32,"value":"$43","pinned":false,"hidden":false,"mode":"ojs"},{"id":5011,"value":"vax_groups = {\n const ret = [{group: \"00-24\"},]\n const vax_grpids = [[\"0-17\",\"18-24\"]];\n const cas_grpids = [[\"0-4\",\"5-14\",\"15-24\"]];\n for (let i = 25; i < 85; i += 10) {\n vax_grpids.push([i+\"-\"+(i+4),(i+5)+\"-\"+(i+9)]);\n cas_grpids.push([i+\"-\"+(i+9)]);\n }\n vax_grpids.push([\"85-89\",\"90+\"]);\n cas_grpids.push([\"85+\"]);\n return {\n vaxed: vax_grpids,\n cases: cas_grpids\n };\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":4998,"value":"function extract_vax_groups(arr, shot) {\n const vax_grpids = [[\"0-17\",\"18-24\"]];\n const cas_grpids = [[\"0-4\",\"5-14\",\"15-24\"]];\n for (let i = 25; i < 85; i += 10) {\n vax_grpids.push([i+\"-\"+(i+4),(i+5)+\"-\"+(i+9)]);\n cas_grpids.push([i+\"-\"+(i+9)]);\n }\n vax_grpids.push([\"85-89\",\"90+\"]);\n cas_grpids.push([\"85+\"]);\n return cas_grpids;\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":46,"value":"diffProps = function(objA, objB) {\n const ret = {};\n for (let p in objA) {\n ret[p] = minusOrNull(objA[p], objB[p]);\n }\n return ret;\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":4812,"value":"function divProps(objA, objB) {\n const ret = {};\n if (!objB) {\n return ret;\n }\n for (let p in objA) {\n ret[p] = divOrNull(objA[p], objB[p]);\n }\n return ret;\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":36,"value":"fetchAges = function(row, prefix, sexKey) {\n const ret = {};\n age_group_names.forEach(g => {\n ret[g] = row[prefix+g+'.todate'] / (sexKey ? age_groups[g][sexKey] : 1);\n });\n return ret;\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":1310,"value":"function avg2(a, b) {\n return 0.5 * (a + b);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":1303,"value":"function allAvg(a, b) {\n const retObj = {};\n for (let prop in a) {\n if (!isNaN(0 - a[prop])) {\n retObj[prop] = avg2(a[prop], b[prop]);\n } else {\n retObj[prop] = allAvg(a[prop], b[prop]);\n }\n }\n return retObj;\n }","pinned":false,"hidden":false,"mode":"ojs"},{"id":1279,"value":"attack_rates_intrp = {\n const ret = [];\n ret.push({...attack_rates[0], group: '0-4'});\n attack_rates.forEach((a, idx) => {\n if (idx == 0) {\n return;\n }\n const ha = a.hosp_rate;\n const hb = attack_rates[idx-1].hosp_rate;\n ret.push(({\n group: (idx*10-5) + '-' + (idx*10 + 4),\n hosp_rate: allAvg(ha, hb)\n }));\n });\n ret.push({...attack_rates[attack_rates.length-1], group: '85+'});\n return ret;\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":1276,"value":"$44","pinned":false,"hidden":false,"mode":"ojs"},{"id":102,"value":"age_group_names = ['0-4','5-14','15-24','25-34','35-44','45-54','55-64','65-74','75-84','85+'];","pinned":false,"hidden":false,"mode":"ojs"},{"id":128,"value":"age_group_colors = ['#FFEEBA','#FFDA6B','#E9B825','#AEEFDB','#52C4A2','#33AB87','#189A73','#F4B2E0','#D559B0','#B01C83'].map(c => d3.hsl(c).darker(2));","pinned":false,"hidden":false,"mode":"ojs"},{"id":10,"value":"age_groups = d3.csv('https://raw.githubusercontent.com/sledilnik/data/master/csv/dict-age-groups.csv', d3.autoType).then(a => {\n const ret = {};\n a.forEach(row => {\n ret[row.id] = row;\n });\n return ret;\n});","pinned":false,"hidden":false,"mode":"ojs"},{"id":5,"value":"d3 = require('d3@6')","pinned":false,"hidden":false,"mode":"ojs"},{"id":5392,"value":"","pinned":true,"hidden":false,"mode":"ojs"},{"id":3113,"value":"style = html`\n\n\n\n`","pinned":false,"hidden":false,"mode":"ojs"}],"files":"$W45","stdlib":"1","titling":"auto"}