32:T68c,{ const avg = 7; const avgCH = 7; const slc = /*190;*/216; const off = 6; const off_out = off + 7; const off_icu = off; const ptsdata = datepointsRunning(avg).slice(slc); const config = [ { "name": "CH", "colour": "#bbbb44", "data": seriesData(datepointsRunning(avgCH).slice(slc).filter(d => d.confirmed_whosp_e > 0),'confirmed_whosp_e').map((d, indx, arr) => ({...d, value: 0.01 + d.value/avgCH*3.3})), "textoff": -10 },{ "name": "H.in ("+off+"d)", "colour": "#bb7711", "data": seriesData(datepointsRunning(avg).slice(slc),'hospital').map((d, indx, arr) => ({...d, value: 0.01 + ((indx + off) < arr.length ? arr[indx + off].value : NaN)/avg})).filter(d => d.value ? d.value : null), "textoff": 10 },{ "name": "H.out ("+off_out+"d)", "colour": "#22bb66", "data": seriesData(datepointsRunning(avg).slice(slc),'hospital_out').map((d, indx, arr) => ({...d, value: 0.01 + ((indx + off_out) < arr.length ? arr[indx + off_out].value : NaN)/avg})).filter(d => d.value ? d.value : null), "textoff": 10 }/*,{ "name": "3*ICU.in ("+off_out+"d)", "colour": "#bb5544", "data": seriesData(datepointsRunning(avg).slice(slc),'icu').map((d, indx, arr) => ({...d, value: 0.01 + ((indx + off_out) < arr.length ? 3 * arr[indx + off_icu].value : NaN)/avg})).filter(d => d.value ? d.value : null), "textoff": 10 }*/]; const chartOptions = { height: width * 0.45, yFormat: d3.format('.1r'), yLog: true }; const chrt = create_chart([1,800], ptsdata, chartOptions); config.forEach(c => line_with_text(chrt, c, chartOptions)); return chrt.svg.node(); }33:T7cc,create_chart = function(maxY, data, options) { const opts = { yFormat: d3.format('.1%'), yLog: false, height: width * 9 / 16, ...options } const height = opts.height; const mxY = (maxY.length && maxY[1]) || maxY; const mnY = (maxY.length && maxY[0]) || (opts.yLog ? 0.01 : 0); const margin = { top: 5, right: 120, bottom: 30, left: 40 }; const first_date = data[0].date; const last_date = data[data.length-1].date; const xScale = d3.scaleTime() .domain([first_date, last_date]).range([margin.left, width - margin.right]); const yScale = (opts.yLog ? d3.scaleLog() : d3.scaleLinear()) .domain([mnY, mxY]).range([height - margin.bottom, margin.top]); const xAxis = (g) => g .attr('transform', `translate(0,${height - margin.bottom})`) .call(d3.axisBottom(xScale)); const yAxis = (g) => g .attr('transform', `translate(${margin.left},0)`) .call(d3.axisLeft(yScale).ticks(Math.ceil(height/100)).tickFormat(opts.yFormat)); const line = d3.line() .defined(d => d.value != null && !isNaN(d.value)) .x(d => xScale(d.date)) .y(d => yScale(d.value)); // Create an empty SVG with specified width and height. const svg = d3.select(DOM.svg(width, height)); const xGrid = (g) => g .attr('stroke', '#eee') .selectAll('line') .data(xScale.ticks()) .join('line') .attr('x1', d => xScale(d)) .attr('x2', d => xScale(d)) .attr('y1', margin.top) .attr('y2', height - margin.bottom); const yGrid = (g) => g .attr('stroke', '#eee') .selectAll('line') .data(yScale.ticks(Math.ceil(height/30))) .join('line') .attr('x1', margin.left) .attr('x2', width - margin.right) .attr('y1', d => yScale(d)) .attr('y2', d => yScale(d)) svg.append('g').call(xGrid); svg.append('g').call(yGrid); // Draw the x and y axes. svg.append('g').call(xAxis); svg.append('g').call(yAxis); return {svg, line, xScale, yScale, last_x : xScale(last_date)}; }34:T487,area_chart = function(dataConfig, maxY = 0.5) { const chrt = create_chart(maxY, dataConfig[0].data); const area = d3.area() .x(d => chrt.xScale(d.date)) .y0(d => chrt.yScale(d.low)) .y1(d => chrt.yScale(d.high)); dataConfig.forEach(c => { chrt.svg.append("path") .datum(c.data) .attr("fill", c.colour) .attr("stroke", "none") .attr("opacity", "10%") .attr("stroke-width", 1.5) .attr("d", area); }); dataConfig.forEach(c => { const subNames = c.offNames || ["C","D","N"]; line_with_text(chrt, { "name": subNames[0] + " " + c.name, "colour": c.colour, "opacity": 0.6, "data": c.data.map(d => ({date: d.date, value: d.value})), "textoff": 0 }); line_with_text(chrt, { "name": subNames[1] + " " + c.name, "colour": c.colour, "data": c.data.map(d => ({date: d.date, value: d.low})), "textoff": 20 }); line_with_text(chrt, { "name": subNames[2] + " " + c.name, "colour": c.colour, "data": c.data.map(d => ({date: d.date, value: d.high})), "textoff": -20 }); }); return chrt.svg.node(); }35:T775,datepoints = stats.slice(0,stats.length).filter(s=>s.day>=1).map((s, idx) => { const confirmed = 0 + s["cases.confirmed.todate"]; const confirmed_dso = 0 + s["cases.rh.occupant.confirmed.todate"]; const confirmed_nodso = confirmed - confirmed_dso; const deceased = 0 + s["state.deceased.todate"]; const h_in = 0 + s["state.in_hospital.todate"]; const h_active = 0 + s["state.in_hospital"]; const h_dec = 0 + patients[idx]["state.deceased.hospital.todate"]; const h_out = 0 + h_in - h_active - h_dec; const home_dec = deceased - h_dec; const h_in_ord = h_in + home_dec; const icu_in = 0 + patients[idx]["state.icu.todate"]; const icu_active = 0 + s["state.icu"]; const icu_dec = 0 + patients[idx]["state.deceased.hospital.icu.todate"]; const icu_rec = 0 + icu_in - icu_active - icu_dec; const hnorm_dec = h_dec - icu_dec; const icu_in_ord = icu_in + home_dec + hnorm_dec; const confirmed_whosp = weighted(s, weights_hospitalization); const confirmed_whepisari = weighted_sari(s, weights_hosp_EPISARI_dec_feb); const confirmed_wicu = weighted(s, weights_icu); const confirmed_wdeaths = weighted(s, weights_deaths); return ({ "day": s.day, "date": s.date, "confirmed": confirmed ? confirmed : stats[idx-1]["cases.confirmed.todate"], "confirmed_dso": confirmed_dso, "confirmed_nodso": confirmed_nodso, "confirmed_whosp": confirmed_whosp, "confirmed_whosp_e": confirmed_whepisari, "confirmed_wicu" : confirmed_wicu, "confirmed_wdeaths": confirmed_wdeaths, "deceased": deceased, "hospital": h_in, "hospital_wd": h_in_ord, "hospital_active": h_active, "hospital_out": h_out, "hospital_dec": h_dec, "icu": icu_in, "icu_wdh": icu_in + hnorm_dec, "icu_wd": icu_in_ord, "icu_active" : icu_active, "icu_out": icu_in - icu_active - icu_dec, "icu_rec": icu_rec, "icu_dec": icu_dec }); });36:[] 30:{"title":"Deleži resnih primerov in smrti","cells":[{"id":0,"value":"html`\n

Deleži resnih primerov in smrti

\nSledilnik COVID-19\n

\n`","pinned":false,"hidden":false,"mode":"ojs"},{"id":509,"value":"md`## Ratio H/C: 21-day running sum`","pinned":false,"hidden":false,"mode":"ojs"},{"id":460,"value":"{\n const ptsdata = datepointsRunning(7).slice(1,-1);\n return ratios_chart(ptsdata, 0.15,[\n {\n \"name\": \"H/C (0d)\",\n \"colour\": \"#ffb977\",\n \"data\": ratioData(ptsdata,'hospital','confirmed',0),\n \"textoff\": 0\n },{\n \"name\": \"H/C (5d)\",\n \"colour\": \"#ffa249\",\n \"data\": ratioData(ptsdata,'hospital','confirmed',5),\n \"textoff\": -20\n },{\n \"name\": \"H/C (10d)\",\n \"colour\": \"#fd8b03\",\n \"data\": ratioData(ptsdata,'hospital','confirmed',10),\n \"textoff\": -40\n }\n ]);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":3684,"value":"md`## Ratio ICU/C: 21-day running sum`","pinned":false,"hidden":false,"mode":"ojs"},{"id":3687,"value":"{\n const ptsdata = datepointsRunning(21).slice(1,-1);\n return ratios_chart(ptsdata, 0.03, [\n {\n \"name\": \"I/C (5d)\",\n \"colour\": \"#00bbee\",\n \"data\": ratioData(ptsdata,'icu','confirmed',5)\n },{\n \"name\": \"I/C (10d)\",\n \"colour\": \"#dd382d\",\n \"data\": ratioData(ptsdata,'icu','confirmed',10)\n },{\n \"name\": \"I/C (15d)\",\n \"colour\": \"#FF6655\",\n \"data\": ratioData(ptsdata,'icu','confirmed',15)\n }\n ]);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":910,"value":"md`## Ratio ICU/H: 21-day running sum`","pinned":false,"hidden":false,"mode":"ojs"},{"id":893,"value":"{\n const ptsdata = datepointsRunning(21).slice(1,-1);\n return ratios_chart(ptsdata, 0.35, [\n {\n \"name\": \"I/H (-3d)\",\n \"colour\": \"#00bbee\",\n \"data\": ratioData(ptsdata,'icu','hospital',-3),\n \"textoff\": -60\n },{\n \"name\": \"I/H (0d)\",\n \"colour\": \"#dd382d\",\n \"data\": ratioData(ptsdata,'icu','hospital',0),\n \"textoff\": 0\n },{\n \"name\": \"I/H (3d)\",\n \"colour\": \"#FF6655\",\n \"data\": ratioData(ptsdata,'icu','hospital',3),\n \"textoff\": 60\n }\n ]);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":926,"value":"md`## Ratio D/C: 21-day running sum`","pinned":false,"hidden":false,"mode":"ojs"},{"id":913,"value":"{\n const ptsdata = datepointsRunning(21).slice(1,-1);\n return ratios_chart(ptsdata, 0.03,[\n {\n \"name\": \"D/C (7d)\",\n \"colour\": \"#906495\",\n \"data\": ratioData(ptsdata,'deceased','confirmed',7),\n \"textoff\": -20\n },{\n \"name\": \"D/C (14d)\",\n \"colour\": \"#551133\",\n \"data\": ratioData(ptsdata,'deceased','confirmed',14),\n \"textoff\": -40\n },{\n \"name\": \"D/C (21d)\",\n \"colour\": \"#004477\",\n \"data\": ratioData(ptsdata,'deceased','confirmed',21),\n \"textoff\": -60\n }\n ]);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":3153,"value":"md`#### Sprejemi in odpusti v H ter primeri glede na tveganje za hospitalizacijo`","pinned":false,"hidden":false,"mode":"ojs"},{"id":2014,"value":"$32","pinned":false,"hidden":false,"mode":"ojs"},{"id":1752,"value":"md`CH: cases weighted according to ECDC averages for age-and-sex-related risk of hospitaization for EU/UK`","pinned":false,"hidden":false,"mode":"ojs"},{"id":1632,"value":"{\n const ptsdata = datepointsRunning(49).slice(0);\n return ratios_chart(ptsdata, 2, [\n {\n \"name\": \"CH/H (1d)\",\n \"colour\": \"#ffcc88\",\n \"data\": ratioData(ptsdata,'confirmed_whosp','hospital',-2),\n \"textoff\": 10\n },{\n \"name\": \"CH/H (5d)\",\n \"colour\": \"#ffbb55\",\n \"data\": ratioData(ptsdata,'confirmed_whosp','hospital',-5),\n \"textoff\": 0\n },{\n \"name\": \"CH/H (7d)\",\n \"colour\": \"#ffa249\",\n \"data\": ratioData(ptsdata,'confirmed_whosp','hospital',-8),\n \"textoff\": -1\n }\n ]);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":1905,"value":"{\n const ptsdata = datepointsRunning(14).slice(0,-1);\n return ratios_chart(ptsdata, 0.4,[\n {\n \"name\": \"CH/C (0d)\",\n \"colour\": \"#ffb977\",\n \"data\": ratioData(ptsdata,'confirmed_whosp','confirmed',0),\n \"textoff\": 0\n },{\n \"name\": \"CD/C (0d)\",\n \"colour\": \"#8800aa\",\n \"data\": ratioData(ptsdata,'confirmed_wdeaths','confirmed',0),\n \"textoff\": 0\n },{\n \"name\": \"CD/CH (0d)\",\n \"colour\": \"#aaaaaa\",\n \"data\": ratioData(ptsdata,'confirmed_wdeaths','confirmed_whosp',0),\n \"textoff\": 0\n }\n ]);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":3630,"value":"md`Hd/C ... Hd includes new hospital admissions and deaths outside a hospital`","pinned":false,"hidden":false,"mode":"ojs"},{"id":3635,"value":"{\n const ptsdata = datepointsRunning(21).slice(0,-1);\n return ratios_chart(ptsdata, 0.15,[\n {\n \"name\": \"Hd/C (0d)\",\n \"colour\": \"#ffb977\",\n \"data\": ratioData(ptsdata,'hospital_wd','confirmed',0),\n \"textoff\": 0\n },{\n \"name\": \"Hd/C (5d)\",\n \"colour\": \"#ffa249\",\n \"data\": ratioData(ptsdata,'hospital_wd','confirmed',5),\n \"textoff\": -20\n },{\n \"name\": \"Hd/C (10d)\",\n \"colour\": \"#fd8b03\",\n \"data\": ratioData(ptsdata,'hospital_wd','confirmed',10),\n \"textoff\": -40\n }\n ]);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":3660,"value":"md`Id/H ... Id includes deaths on regular non-ICU hospital wards`","pinned":false,"hidden":false,"mode":"ojs"},{"id":3665,"value":"{\n const ptsdata = datepointsRunning(21).slice(100);\n return ratios_chart(ptsdata, 0.5, [\n {\n \"name\": \"Id/H (-6d)\",\n \"colour\": \"#00ddff\",\n \"data\": ratioData(ptsdata,'icu_wdh','hospital',-6),\n \"textoff\": -80\n },{\n \"name\": \"Id/H (-3d)\",\n \"colour\": \"#c091cc\",\n \"data\": ratioData(ptsdata,'icu_wdh','hospital',-3),\n \"textoff\": -40\n },{\n \"name\": \"Id/H (0d)\",\n \"colour\": \"#dd382d\",\n \"data\": ratioData(ptsdata,'icu_wdh','hospital',0),\n \"textoff\": 0\n },{\n \"name\": \"Id/H (3d)\",\n \"colour\": \"#ec6754\",\n \"data\": ratioData(ptsdata,'icu_wdh','hospital',3),\n \"textoff\": 40\n },{\n \"name\": \"Id/H (6d)\",\n \"colour\": \"#feb4a6\",\n \"data\": ratioData(ptsdata,'icu_wdh','hospital',6),\n \"textoff\": 80\n }\n ]);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":1740,"value":"{\n const ptsdata = datepointsRunning(21).slice(103);\n return ratios_chart(ptsdata, 2.4,[\n {\n \"name\": \"D/CD (7d)\",\n \"colour\": \"#716495\",\n \"data\": ratioData(ptsdata,'deceased','confirmed_wdeaths',7),\n \"textoff\": 0\n },{\n \"name\": \"D/CD (11d)\",\n \"colour\": \"#516495\",\n \"data\": ratioData(ptsdata,'deceased','confirmed_wdeaths',11),\n \"textoff\": 0\n },{\n \"name\": \"D/CD (14d)\",\n \"colour\": \"#316495\",\n \"data\": ratioData(ptsdata,'deceased','confirmed_wdeaths',14),\n \"textoff\": 20\n }\n ]);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":1843,"value":"{\n const ptsdata = datepointsRunning(7).slice(0, -2);\n return ratios_chart(ptsdata, 0.06,[\n {\n \"name\": \"CD/C (21d)\",\n \"colour\": \"#706495\",\n \"data\": ratioData(ptsdata,'confirmed_wdeaths','confirmed',8),\n \"textoff\": -0.005\n }\n ]);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":1326,"value":"md`## Ratio hosp_D/hosp_in: 21-day running sum`","pinned":false,"hidden":false,"mode":"ojs"},{"id":1324,"value":"{\n const ptsdata = datepointsRunning(21);\n return ratios_chart(ptsdata, 0.35 ,[\n {\n \"name\": \"Hd/Hi(8d)\",\n \"colour\": \"#776622\",\n \"data\": ratioData(ptsdata,'hospital_dec','hospital',8),\n \"textoff\": -0.04\n },{\n \"name\": \"Hd/Hi(11d)\",\n \"colour\": \"#776622\",\n \"data\": ratioData(ptsdata,'hospital_dec','hospital',11),\n \"textoff\": -5\n },{\n \"name\": \"Hd/Hi(14d)\",\n \"colour\": \"#776622\",\n \"data\": ratioData(ptsdata,'hospital_dec','hospital',14),\n \"textoff\": 5\n }\n ]);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":1354,"value":"md`## Ratio hosp_out/hosp_in: 21-day running sum`","pinned":false,"hidden":false,"mode":"ojs"},{"id":1352,"value":"{\n const ptsdata = datepointsRunning(21);\n return ratios_chart(ptsdata, 1.5,[\n {\n \"name\": \"Ho/Hi(0d)\",\n \"colour\": \"#00cc22\",\n \"data\": ratioData(ptsdata,'hospital_out','hospital',0),\n \"textoff\": -0.015\n },{\n \"name\": \"Ho/Hi(5d)\",\n \"colour\": \"#00aa22\",\n \"data\": ratioData(ptsdata,'hospital_out','hospital',5),\n \"textoff\": -0.015\n },{\n \"name\": \"Ho/Hi(7d)\",\n \"colour\": \"#008822\",\n \"data\": ratioData(ptsdata,'hospital_out','hospital',7),\n \"textoff\": -0.015\n },{\n \"name\": \"Ho/Hi(11d)\",\n \"colour\": \"#006611\",\n \"data\": ratioData(ptsdata,'hospital_out','hospital',11),\n \"textoff\": -0.015\n },{\n \"name\": \"Ho/Hi(14d)\",\n \"colour\": \"#004411\",\n \"data\": ratioData(ptsdata,'hospital_out','hospital',14),\n \"textoff\": -0.015\n }\n ]);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":40,"value":"ratios_chart = function(ptsdata, maxVal = 0.4, config){ \n const chrt = create_chart(maxVal, ptsdata);\n config.forEach(c => line_with_text(chrt, c));\n return chrt.svg.node();\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":854,"value":"datepointsRunning(70).slice(158)","pinned":true,"hidden":false,"mode":"ojs"},{"id":848,"value":"ratioData(datepointsRunning(70),'confirmed','hospital',-2).slice(-3)","pinned":true,"hidden":false,"mode":"ojs"},{"id":1061,"value":"13680/865","pinned":true,"hidden":false,"mode":"ojs"},{"id":549,"value":"ratioData = function(series, nom, denom, off) {\n const offLeft = Math.floor((off+1) / 2);\n const offRight = off - offLeft;\n //return [offLeft, offRight];\n return series\n .map((d, indx, arr) => ({\n date: d.date,\n value: !chkbounds(arr.length, indx, offLeft, offRight)\n ? null\n : [arr[indx + offLeft][nom], arr[indx - offRight][denom]]\n }))\n .map((d, indx, arr) => ({\n date: d.date,\n value: d.value ? ratio(d.value[0], d.value[1]) : null\n }))\n .filter(d => (d.value || d.value===0));\n}","pinned":true,"hidden":false,"mode":"ojs"},{"id":2010,"value":"function seriesData(series, key) {\n return series.map((d, indx, arr) => ({\n date: d.date,\n value: d[key]\n })).filter(d => (+d.value || d.value===0));\n};","pinned":true,"hidden":false,"mode":"ojs"},{"id":1038,"value":"gauss3date = function(d, indx, arr) {\n const krnl = [0.27901,0.44198,0.27901];\n \n const avgval = (indx < 1 || indx > arr.length - 2)\n ? null\n : (krnl[0]*arr[indx-1].value + krnl[1]*arr[indx].value + krnl[2]*arr[indx+1].value);\n return ({\n date: d.date,\n value: (+avgval || avgval === 0) ? avgval : null\n });\n}","pinned":true,"hidden":false,"mode":"ojs"},{"id":1027,"value":"chkbounds(162, 34, 35, 35)","pinned":true,"hidden":false,"mode":"ojs"},{"id":1020,"value":"chkbounds = function(len, indx, padLeft, padRight) {\n const pad = Math.max(Math.abs(padLeft), Math.abs(padRight));\n return indx >= pad && indx < len - pad; \n}","pinned":true,"hidden":false,"mode":"ojs"},{"id":484,"value":"ratio = function(a,b) {\n return (b > 0) ? a / b : null;\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":341,"value":"$33","pinned":false,"hidden":false,"mode":"ojs"},{"id":377,"value":"line_with_text = function (chrt, c, options) {\n const opts = {\n yFormat: d3.format('.2p'),\n ...options\n };\n // Draw the line.\n chrt.svg.append('path')\n .attr(\"fill\", \"none\")\n .attr(\"stroke\", c.colour)\n .attr(\"opacity\", (c.opacity || \"100%\"))\n .datum(c.data)\n .attr('d', chrt.line);\n const last_val = c.data[c.data.length-1].value;\n chrt.svg.append(\"text\")\n .attr(\"x\", chrt.last_x) \n .attr(\"y\", chrt.yScale(last_val) + (c.textoff ? c.textoff - 0.005 : -0.005))\n .attr(\"text-anchor\", \"start\")\n .attr(\"fill\", c.colour)\n .attr(\"opacity\", (c.opacity || \"100%\"))\n .style(\"font-size\", \"16px\")\n .text(c.name + \": \" + opts.yFormat(last_val));\n \n }","pinned":false,"hidden":false,"mode":"ojs"},{"id":404,"value":"md`## Mortality - Deceased (D) vs. not recovered (N)`","pinned":false,"hidden":false,"mode":"ojs"},{"id":520,"value":"area_chart([area_data_H(datepoints), area_data_ICU(datepoints)])","pinned":false,"hidden":false,"mode":"ojs"},{"id":3551,"value":"md`## Mortality in H 4^thw. [**D**eceased, **C**losed only, **N**ot recovered]`","pinned":false,"hidden":false,"mode":"ojs"},{"id":3557,"value":"area_chart([area_data_H(datepointsOffset(501).slice(0))], 0.85)","pinned":false,"hidden":false,"mode":"ojs"},{"id":3489,"value":"md`## Mortality in H 3^rdw. [**D**eceased, **C**losed only, **N**ot recovered]`","pinned":false,"hidden":false,"mode":"ojs"},{"id":3487,"value":"area_chart([area_data_H(datepointsOffset(378).slice(0,123))], 0.55)","pinned":false,"hidden":false,"mode":"ojs"},{"id":1501,"value":"md`## Mortality in H 2^ndw. [**D**eceased, **C**losed only, **N**ot recovered]`","pinned":false,"hidden":false,"mode":"ojs"},{"id":956,"value":"area_chart([area_data_H(datepointsOffset(100).slice(0,279))], 0.55)","pinned":false,"hidden":false,"mode":"ojs"},{"id":1974,"value":"md`## Mortality in H 1^stw. [**D**eceased, **C**losed only, **N**ot recovered]`","pinned":false,"hidden":false,"mode":"ojs"},{"id":1540,"value":"area_chart([area_data_H(datepoints.slice(0,100))], 0.65)","pinned":false,"hidden":false,"mode":"ojs"},{"id":3570,"value":"md`## Mortality in ICU 4^thw. [**D**eceased, **C**losed only, **N**ot recovered]`","pinned":false,"hidden":false,"mode":"ojs"},{"id":3572,"value":"area_chart([area_data_ICU(datepointsOffset(505))], 1)","pinned":false,"hidden":false,"mode":"ojs"},{"id":1534,"value":"md`## Mortality in ICU 2^ndw. [**D**eceased, **C**losed only, **N**ot recovered]`","pinned":false,"hidden":false,"mode":"ojs"},{"id":1532,"value":"area_chart([area_data_ICU(datepointsOffset(113).slice(0,405))], 0.65)","pinned":false,"hidden":false,"mode":"ojs"},{"id":1965,"value":"md`## Mortality in ICU 1^stw. [**D**eceased, **C**losed only, **N**ot recovered]`","pinned":false,"hidden":false,"mode":"ojs"},{"id":1551,"value":"area_chart([area_data_ICU(datepoints.slice(0,100))], 0.65)","pinned":false,"hidden":false,"mode":"ojs"},{"id":2220,"value":"area_chart([\n {\n name: \"H\",\n offNames: [\"C_7d\",\"C_0d\",\"C_14d\"],\n data: datepointsOffset(0).slice(8,-1).map((d, indx, arr) => {\n const offIdx1 = indx-7;\n const offIdx2 = indx-14;\n return ({\n date: d.date,\n low: d.hospital ? d.hospital/d.confirmed : null,\n high: d.hospital && offIdx2 > 0 ? d.hospital/(arr[offIdx2].confirmed) : 1,\n value: d.hospital && offIdx1 > 0 ? d.hospital/(arr[offIdx1].confirmed) : ((1+d.hospital/d.confirmed)/2)\n });\n }),\n colour: \"darkorange\"\n }\n], 0.3)","pinned":false,"hidden":false,"mode":"ojs"},{"id":2346,"value":"{\n const rng = datepointsRunning(28).slice(0,-1);\n const sDate = rng.map(d => d.date);\n const sDenom = rng.map(d => d.confirmed_whosp)\n .map((d, idx, arr) => geomavg(arr, idx-3, idx))\n .map((d, idx, arr) => geomavg(arr, idx-3, idx))\n ;\n const sNum = rng.map(d => d.hospital).map((d, idx, arr) => geomavg(arr, idx-2, idx));\n \n return area_chart([\n {\n name: \"CH\",\n offNames: [\"H[2d]\",\"H[4d]\",\"H[0d]\"],\n data: rng.map((d, indx, arr) => {\n const offIdx1 = indx+0;\n const offIdx2 = indx+2;\n const offIdx3 = indx+4;\n return ({\n date: sDate[indx],\n low: sNum[offIdx3] && offIdx3 > 0 ? sNum[offIdx3]/sDenom[indx] : null,\n value: sNum[offIdx2] && offIdx2 > 0 ? sNum[offIdx2]/(sDenom[indx]) : null,\n high: sNum[offIdx1] && offIdx1 > 0 ? sNum[offIdx1]/(sDenom[indx]) : null,\n });\n }),\n colour: \"darkorange\",\n height: 300\n }\n], 3.7);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":2266,"value":"area_chart([\n {\n name: \"I\",\n offNames: [\"H_4d\",\"H_0d\",\"H_7d\"],\n data: datepointsOffset(7).map((d, indx, arr) => {\n const offIdx1 = indx;\n const offIdx2 = indx - 4;\n const offIdx3 = indx - 7;\n return ({\n date: d.date,\n low: d.icu && offIdx1 > 0 && offIdx1 < arr.length ? d.icu/(arr[offIdx1].hospital) : null,\n value: d.icu && offIdx2 > 0 ? d.icu/(arr[offIdx2].hospital) : 0.5,\n high: d.icu && offIdx3 > 0 ? d.icu/(arr[offIdx3].hospital) : 1\n });\n }),\n colour: \"darkred\"\n }\n], 0.3)","pinned":false,"hidden":false,"mode":"ojs"},{"id":2295,"value":"area_chart([\n {\n name: \"D\",\n offNames: [\"C_10d\",\"C_0d\",\"C_20d\"],\n data: datepointsOffset(170).slice(0,-1).map((d, indx, arr) => {\n const offIdx1 = indx;\n const offIdx2 = indx-10;\n const offIdx3 = indx-20;\n return ({\n date: d.date,\n low: d.hospital && offIdx1 > 0 ? d.deceased/(arr[offIdx1].confirmed) : 0,\n value: d.hospital && offIdx2 > 0 ? d.deceased/(arr[offIdx2].confirmed) : 0.5,\n high: d.hospital && offIdx3 > 0 ? d.deceased/(arr[offIdx3].confirmed) : 1\n });\n }),\n colour: \"purple\"\n }\n], 0.05)","pinned":false,"hidden":false,"mode":"ojs"},{"id":2196,"value":"function area_data_H(dataPts) {\n return ({\n name: \"H\",\n data: dataPts.map(d => ({\n date: d.date,\n low: d.hospital ? d.hospital_dec/d.hospital : null,\n high: d.hospital ? (d.hospital_dec + d.hospital_active)/d.hospital : null,\n value: d.hospital_out ? d.hospital_dec/(d.hospital_dec + d.hospital_out) : null\n })),\n colour: \"darkorange\"\n });\n};","pinned":false,"hidden":false,"mode":"ojs"},{"id":2204,"value":"function area_data_ICU(dataPts) {\n return ({\n \"name\": \"ICU\",\n \"data\": dataPts.map(d => ({\n date: d.date,\n low: d.icu ? d.icu_dec/d.icu : null,\n high: d.icu ? (d.icu_dec + d.icu_active)/d.icu : null,\n value: d.icu_out ? d.icu_dec/(d.icu_dec + d.icu_out) : null\n })),\n \"colour\": \"#db7169\" \n });\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":2597,"value":"function area_data_ICU_Prob(dataPts) {\n return ({\n \"name\": \"ICU\",\n \"data\": dataPts.map(d => ({\n date: d.date,\n low: d.icu ? d.icu/d.hospital : null,\n high: d.icu ? (d.hospital_active)/d.hospital : null,\n value: d.icu_out ? d.hospital_out/(d.hospital_dec + d.hospital_dec) : null\n })),\n \"colour\": \"#db7169\" \n });\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":337,"value":"$34","pinned":false,"hidden":false,"mode":"ojs"},{"id":113,"value":"html`\n`","pinned":false,"hidden":false,"mode":"ojs"},{"id":20,"value":"md`## Podatki`","pinned":false,"hidden":false,"mode":"ojs"},{"id":1618,"value":"weights_hospitalization=[\n 2.8, 1.1, 2.3, 3.7, 4.4, 6.6, 13.8, 27.5, 28.5,\n 3.5, 1.2, 2.1, 4.0, 7.3, 12.1, 22.6, 38.4, 44.3\n].map(a => a/100);","pinned":true,"hidden":false,"mode":"ojs"},{"id":3295,"value":"weights_hosp_EPISARI_dec_feb = [\n 0.032822757,\t0.002592353,\t0.000666667,\t0.000978234,\t0.002803829,\t0.007854194,\t0.02610685,\t0.091454633,\t0.176411627,\t0.184586108,\n 0.015717092,\t0,\t0.000469704,\t0.002033812,\t0.00827601,\t0.019358469,\t0.060459325,\t0.15269257,\t0.262322473,\t0.314180929\n];","pinned":true,"hidden":false,"mode":"ojs"},{"id":3156,"value":"stats[250]","pinned":true,"hidden":false,"mode":"ojs"},{"id":17,"value":"stats = d3.csv(\"https://raw.githubusercontent.com/sledilnik/data/master/csv/stats.csv\", d3.autoType);","pinned":false,"hidden":false,"mode":"ojs"},{"id":5,"value":"patients = d3.csv(\"https://raw.githubusercontent.com/sledilnik/data/master/csv/patients.csv\", d3.autoType);","pinned":false,"hidden":false,"mode":"ojs"},{"id":22,"value":"$35","pinned":false,"hidden":false,"mode":"ojs"},{"id":1620,"value":"weights_deaths=[0,0,0,0.1,0.1,0.3,1.8,8.1,19,0,0,0,0.1,0.3,1.1,4.6,15.3,30.7].map(a => a/100);","pinned":false,"hidden":false,"mode":"ojs"},{"id":1624,"value":"weights_icu = [0.1, 0.04, 0.1, 0.2, 0.3, 0.6, 1.9, 3.4, 2.1, 0.1, 0.1, 0.1, 0.3, 0.9, 2.1, 4.9, 6.9, 4.3].map(a => a/100);","pinned":false,"hidden":false,"mode":"ojs"},{"id":1608,"value":"weighted(stats[200],[1,1,1,1,1,1,1,1,1,1,1,1,1,0,0,0,0,0])","pinned":true,"hidden":false,"mode":"ojs"},{"id":3298,"value":"function weighted_sari(s, weights) {\n let ret = 0;\n agePropNames.slice(0, 10).forEach((p, i) => {\n ret += s[p] * weights[i];\n });\n agePropNames.slice(10).forEach((p, i) => {\n ret += s[p] * weights[i];\n });\n return ret;\n}","pinned":true,"hidden":false,"mode":"ojs"},{"id":1600,"value":"function weighted(s, weights) {\n let ret = 0;\n let prev = 0;\n agePropNames.slice(0, 10).forEach((p, i) => {\n const cur = s[p];\n if (i != 0) {\n ret += (prev + cur) * 0.5 * weights[i-1];\n }\n prev = cur;\n });\n agePropNames.slice(10).forEach((p, i) => {\n const cur = s[p];\n if (i != 0) {\n ret += (prev + cur) * 0.5 * weights[9 + i - 1];\n }\n prev = cur;\n });\n return ret;\n}","pinned":true,"hidden":false,"mode":"ojs"},{"id":1601,"value":"agePropNames = {\n const ret = [];\n for (let i = -5; i<85; i+=10) {\n ret.push(Math.max(0,i)+'-'+(i+9));\n }\n ret.push('85+');\n \n return [...ret.map(a => 'female.'+a), ...ret.map(a => 'male.'+a)].map(a => 'age.'+a+'.todate');\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":1648,"value":"agePropNames.slice(0,10)","pinned":true,"hidden":false,"mode":"ojs"},{"id":1205,"value":"datepoints[3]","pinned":true,"hidden":false,"mode":"ojs"},{"id":1282,"value":"datepointsOffset = function(startIdx, data = datepoints) {\n const ref = data[startIdx];\n return data.slice(startIdx).map((a, idx, arr) => {\n const ret = {};\n for (let key in a) {\n ret[key] = a[key] - ref[key];\n if (key.includes('active')) {\n ret[key] = a[key];\n }\n }\n ret.day = a.day;\n ret.date = a.date;\n return ret;\n }).filter(a => a!=null);\n}","pinned":true,"hidden":false,"mode":"ojs"},{"id":450,"value":"datepointsRunning = function(span) {\n return datepoints.map((a, idx, arr) => {\n if (idx < span) {\n return null;\n }\n const b = arr[idx - span];\n const dVal = arr[idx - Math.round(span/2)];\n const ret = {};\n for (let key in a) {\n ret[key] = a[key] - b[key];\n if (key.startsWith('active_')) {\n ret[key] = a[key];\n }\n }\n ret.day = a.day;\n ret.date = a.date;\n return ret;\n}).filter(a => a!=null);\n}","pinned":false,"hidden":false,"mode":"ojs"},{"id":2440,"value":"function geomavg(arr, startIdx, endIdx) {\n let cum = 1;\n let cnt = 0;\n for (let idx = startIdx; idx <= endIdx; idx++) {\n if (arr[idx]) {\n cum = cum * arr[idx];\n cnt++;\n }\n }\n return Math.pow(cum, 1/cnt);\n}","pinned":true,"hidden":false,"mode":"ojs"},{"id":7,"value":"md`# Setup`","pinned":false,"hidden":false,"mode":"ojs"},{"id":10,"value":"d3 = require('d3@5')","pinned":false,"hidden":false,"mode":"ojs"},{"id":368,"value":"md`## Ratios of patient status - cumulative`","pinned":false,"hidden":false,"mode":"ojs"},{"id":3150,"value":"style = html`\n\n\n\n`","pinned":false,"hidden":false,"mode":"ojs"}],"files":"$W36","stdlib":"1","titling":"auto"}