25:["$","title",null,{"children":"Combined view of sites which may be experiencing convergence in N501Y clades | San Emmanuel James | Observable"}] 49:Tf65,joint_site_list = { let site_list = {}; let sub_count = {}; let internal_branches_only = options.indexOf ("ib") >= 0; let internal_selection_only = options.indexOf ("is") >= 0; let meme_use_pv = options.indexOf ("pv") < 0; let filter_gaps = options.indexOf ("gaps") >= 0; let exclude_sites = {}; if (filter_gaps) { _.each (analysis_info, (data, clade)=> { exclude_sites[clade] = {'6160' : 1, '6163' : 1, '6166' : 1, '6169' : 1, '25401' : 1, '25410' : 1}; _.each (data, (segment)=> { _.each (segment.subs, (subs, site)=>{ if (gapFractions[clade][site] > 0.10) { exclude_sites[clade][site] = 1; } }); }); }); } else { _.each (analysis_info, (data, clade)=>exclude_sites[clade] = {}); } let add_clade_to_meme = (site, clade, tag)=> { tag = tag || "meme"; if (site in site_list == false) { site_list[site] = {}; } if (!site_list[site][tag]) { site_list[site][tag] = new Set(); } site_list[site][tag].add (clade); } let add_subs2list = (site, clade, tag)=> { tag = tag || "subs"; if (site in site_list == false) { site_list[site] = {}; } if (!site_list[site][tag]) { site_list[site][tag] = {}; } if (!site_list[site][tag][clade]) { site_list[site][tag][clade] = new Set(); } } if (meme_use_pv) { _.each (analysis_info_combined.sites, (data, clade)=> { _.each (data, (info, site)=> { if ("bMEME" in info) { if (info.bMEME.p <= pv || (!internal_selection_only && info.lMEME.p <= pv)) { if (!exclude_sites[clade][site]) { add_clade_to_meme(site, clade); } } } }); }); } _.each (analysis_info, (data, clade)=> { sub_count [clade] = 0; _.each (data, (segment)=> { if (meme_use_pv == false) { _.each (segment.tree_tags, (tag)=> { if (tag[0].length && tag[1] && tag[0] != "Reference") { _.each (tag[3], (site)=> { if (!exclude_sites[clade][site]) add_clade_to_meme(site, clade); }); if (!internal_selection_only) { _.each (tag[4], (site)=> { if (!exclude_sites[clade][site]) add_clade_to_meme(site, clade, 'meme-all'); }); } } }); } _.each (segment.subs, (subs, site)=>{ if (exclude_sites[clade][site]) return; if (site in signatures_subs) { add_subs2list (site, clade); _.each (signatures_subs[site][clade], (s)=> site_list[site]['subs'][clade].add (s)); } _.each (subs, (codon, node)=> { if (!segment.tree_tags[node]) return; if (internal_branches_only && segment.tree_tags[node][1] == false) return; if (segment.tree_tags[node][0].length && segment.tree_tags[node][0] != "Reference") { add_subs2list (site, clade); if (codon != '---' ) { sub_count[clade]++; } site_list[site]['subs'][clade].add (translation_table[codon]); } }); }); }); }); return [site_list,sub_count]; }4a:Tb29,buildSiteList = (data)=>{ let rows = []; const classify = (set, n)=> { if (set) { if (annotation[n] && annotation[n].evo) { return _.map ([...set], (r)=> { return [r, annotation[n].evo[r] || 0]; }); } } return set; } _.each (data, (info, site)=> { //console.log (site); let c = +site; let this_row = {}; if (site in reverseLookup == false) { c++; } this_row.n = site; if (!reverseLookup[c]) return; this_row.coord = reverseLookup[c][0][0]; let is_sig = _.find (signatures, (d)=>d.site == +site); let sig_site = false; if ('meme' in info || is_sig) { this_row.tags = {}; if ('meme' in info) { _.each ([...info['meme']], (clade)=>this_row.tags[clade] = {'meme' : 1}); } if (is_sig) { _.each (is_sig, (yn,clade) => { if (yn == 1) { if (clade in this_row.tags == false) { this_row.tags[clade] = {}; } this_row.tags[clade].sig = 1; sig_site = true; } }); } if (info['meme-full']) { _.each ([...info['meme-full']], (clade)=> { if (clade in this_row.tags == false) { this_row.tags[clade] = {}; } this_row.tags[clade] = {'meme-full' : 1}; }); } _.each (info['subs'], (subs,clade) => { //if (!this_row.tags[clade]) { if (this_row.coord == "S/484") { subs.add ("K"); } _.each ([...subs], (aa)=> { if (aa != '-') { _.each (info['subs'], (subs2,clade2)=> { if (clade2 != clade) { if (subs2.has (aa)) { if (clade in this_row.tags == false) { this_row.tags[clade] = {}; } this_row.tags[clade]['subs'] = clade2; } } }); } }); // } }); if ((sig_site || _.size (this_row.tags) > 1) && info["subs"]) { this_row ["V1"] = this_row.tags ["V1"]; this_row ["V2"] = this_row.tags ["V2"]; this_row ["V3"] = this_row.tags ["V3"]; this_row ["V1S"] = classify(info["subs"]["V1"],this_row.n); this_row ["V2S"] = classify(info["subs"]["V2"],this_row.n); this_row ["V3S"] = classify(info["subs"]["V3"],this_row.n); rows.push (this_row); } } }); return rows; } 4b:[] 29:{"id":"513fe368f3395920","slug":null,"title":"Combined view of sites which may be experiencing convergence in N501Y clades","thumbnail":"aa1bb55ddfaf7db57883461b3214bea0f5769ec6ebf097779120348a78175507","access_level":"public","create_time":"$D2023-10-02T08:16:57.633Z","update_time":"$D2023-10-02T08:23:39.840Z","view_time":null,"first_public_time":"$D2023-10-02T08:16:57.633Z","has_unpublished_edits":null,"fork":{"id":"ffe6efaf73e6a91a","slug":"clade-convergence","title":"Combined view of sites which may be experiencing convergence in N501Y clades","owner":{"id":"9bf992815a7b66f2","login":"spond","name":"Sergei Pond"}},"stars":0,"starred":false,"owner":{"type":"team","id":"c9eb24e2b90f32f1","login":"jsan4christ","name":"San Emmanuel James","avatar_url":"https://avatars-next.observableusercontent.com/27de0beb8da8eba37da2d750ff2820ef819226744bf3aa7a34f9e5a25fba20bb","tier":"starter_2024","bio":"","followed_by_you":false,"follows_you":false},"version":800,"publish_version":null,"role":null,"authored":false,"authors":[{"type":"individual","id":"eac258e8777c8b2e","login":"jsan4christ","name":"San Emmanuel James","avatar_url":"https://avatars-next.observableusercontent.com/27de0beb8da8eba37da2d750ff2820ef819226744bf3aa7a34f9e5a25fba20bb","tier":null,"bio":"","followed_by_you":false,"follows_you":false}],"members":[{"type":"individual","id":"eac258e8777c8b2e","login":"jsan4christ","name":"San Emmanuel James","avatar_url":"https://avatars-next.observableusercontent.com/27de0beb8da8eba37da2d750ff2820ef819226744bf3aa7a34f9e5a25fba20bb","tier":null,"role":"editor"}],"comments":[],"custom_thumbnail":false,"trashed":false,"lapsed":null,"subscribed":null,"forks":0,"collection":null,"type":"notebook","body":{"titling":"auto","title":"Combined view of sites which may be experiencing convergence in N501Y clades","cells":[{"id":0,"value":"md`# Combined view of sites which may be experiencing convergence in N501Y clades`","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":800,"value":"","pinned":true,"hidden":false,"mode":"sql","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"","database":"null"},{"id":568,"value":"viewof data_from = select ({\n options : [\"February 2021\", \"April 2021\"],\n title: \"Use analysis from: \"\n})","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":573,"value":"viewof options = checkbox({\n title: \"Filtering options\",\n options: [\n { value: \"ib\", label: \"Convergent substitutions must occur along internal branches\" },\n { value: \"is\", label: \"Selection signal for internal branches only\" },\n { value: \"pv\", label: \"Use MEME EBF-flagged branches as evidence of selection\" },\n { value: \"gaps\", label: \"Filter sites with excessive gaps\"}\n ],\n submit: false\n})","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":626,"value":"viewof pv = text ({\n value : 0.05,\n title: \"p-value for MEME\",\n submit: true\n})","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":211,"value":"md`\n${joint_MEME_list.length} sites found.\n\n1. Signature OR Pos selection with MEME on internal tree branch AND one or more of the following for other lineages\n 1. Pos selection with MEME\n 2. Convergent mutations on internal tree branches to other variant signature\n 3. Convergent mutations on internal tree branches in different variant lineage`","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":520,"value":"legend({\n color: color,\n title: \"Evolutionary Probability\",\n width: 900,\n marginLeft: 50\n})","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":136,"value":"table(\n joint_MEME_list,\n {\n maxHeight:2000,\n limit: 500,\n enableFilter: false,\n enableCSVDownload: false,\n columns: [{ \n key: 'n',\n name: 'Nucleotide',\n }, \n { \n key: 'coord',\n name: 'Site',\n },\n { \n key: 'V1',\n name: 'V1',\n render: (val)=>site_string(val)\n },\n { \n key: 'V2',\n name: 'V2',\n render: (val)=>site_string(val)\n },\n { \n key: 'V3',\n name: 'V3',\n render: (val)=>site_string(val)\n },\n { \n key: 'V1S',\n name: 'V1 subs to',\n render: (val)=>freq_string(val)\n },\n { \n key: 'V2S',\n name: 'V2 subs to',\n render: (val)=>freq_string(val)\n },\n { \n key: 'V3S',\n name: 'V3 subs to',\n render: (val)=>freq_string(val)\n }\n ]\n }\n)","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":157,"value":"md`Selection legend\n 1. : Signtature mutation\n 1. : MEME support\n 2. : convergent subsitutions to another lineage (no MEME support)\n 2. : convergent subsitutions to another lineage AND MEME support\n\n`","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":33,"value":"md`### Computed`","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":463,"value":"pct_fmt = d3.format (\".2p\")","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":145,"value":"freq_string = (f)=> {\n \n if (f) {\n if (_.isArray (f)) {\n return _.map (f, (d)=> {\n if (d[0] == '-') {\n return \"\"; \n } \n return \"\" + d[0] + \"\";\n }).join (\"\");\n } else {\n f.delete (\"-\");\n return [...f].join (\",\");\n }\n }\n return \"\";\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":470,"value":"color = d3.scaleThreshold ().domain ([1e-6,1e-4,0.01,0.05,0.5]).range (['red','yellow','orange','purple','blue','green'])","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":490,"value":"colorText = d3.scaleThreshold ().domain ([1e-6,1e-4,0.01,0.05,0.5]).range (['black','black','black','white','white','white'])","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":174,"value":"site_string = (d)=> {\n let res = [];\n if (d) {\n if ('sig' in d) {\n res.push (''); \n }\n if ('meme' in d) {\n if ('subs' in d) {\n res.push ('');\n } else {\n res.push ('');\n }\n } else {\n if ('subs' in d) {\n res.push ('');\n }\n }\n \n }\n return res.join ('');\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":104,"value":"joint_MEME_list = buildSiteList (joint_site_list[0])","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":788,"value":"JSON.stringify(_.map (joint_MEME_list, (d)=>d.coord.split (\"/\")))","pinned":true,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":552,"value":"convergent_site_set = {\n let csl = {};\n _.each (joint_MEME_list, (s)=> {\n _.each (['V1','V2','V3'], (clade)=> {\n if (s[clade] && s[clade].subs) {\n if (s.n in csl == false) {\n csl[s.n] = {};\n }\n csl[s.n][clade] = new Set (_.map (s[s[clade].subs + \"S\"], (d)=>d[0]));\n \n \n }\n });\n });\n return csl;\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":547,"value":"convergent_site_list = {\n let sub_count = {};\n _.each (analysis_info, (data, clade)=> {\n sub_count [clade] = 0;\n _.each (data, (segment)=> {\n _.each (segment.subs, (subs, site)=>{\n _.each (subs, (codon, node)=> {\n if (!segment.tree_tags[node]) return;\n if (segment.tree_tags[node][0].length && segment.tree_tags[node][0] != \"Reference\") {\n if (codon != '---') {\n if ( site in convergent_site_set && clade in convergent_site_set[site] && convergent_site_set[site][clade].has (translation_table[codon]))\n sub_count[clade]++;\n } \n }\n });\n });\n });\n });\n return sub_count;\n \n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":36,"value":"$49","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":717,"value":"gapFractions = _.fromPairs (_.map (analysis_info_combined.sites, (variants, clade)=> {\n return [clade,_.fromPairs (_.map (variants, (info, site)=> {\n let residue_counts = _.mapValues (_.groupBy (_.flatten (_.map (info.aa, (counts, group)=> {\n return _.toPairs (counts);\n })), (d)=>d[0]), (d)=>d3.sum (d, (v)=>v[1]));\n return [site,(residue_counts['-'] || 0)/d3.sum (_.map (residue_counts))];\n }))];\n}))","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":68,"value":"qvalues = (pvalues,cut)=> {\n cut = cut || qv;\n return _.chain (pvalues).sortBy ((d)=>d[1]).map ((d,i)=>[d[0], d[1], d[1] * pvalues.length/(i+1)]).filter ((d)=>(d[1] <= cut)).value();\n};","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":53,"value":"site2gene = (site)=> {\n if (site in reverseLookup || (+site + 1) in reverseLookup) {\n let lkup = reverseLookup[site] || reverseLookup[+site + 1];\n if (lkup.length > 2) {\n return lkup[1][0].split (\"/\")[0];\n }\n return lkup[0][0].split (\"/\")[0];\n }\n return \"\";\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":391,"value":"_.mapValues (analysis_info, (v)=>_.groupBy (_.toPairs(_.mapValues (v, (g)=>g.busted && g.busted.p <= 0.05)), (d)=>d[1]))","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":761,"value":"$4a","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":20,"value":"md`### Data`","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":30,"value":"qv = 0.01","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":23,"value":"analysis_info_combined = {\n let base_url = \"https://data.hyphy.org/web/SARS-CoV-2/clades/\";\n let info;\n \n if (data_from == \"April 2021\") {\n info = [{label: \"V1\", value: 'B.1.1.7-202104'},\n { label: \"V2\", value: 'B.1.351-202104'},\n { label: \"V3\", value: 'P.1-202104'}];\n } else {\n info = [{label: \"V1\", value: 'B117-Feb2020'},\n { label: \"V2\", value: 'B1351-Feb2020'},\n { label: \"V3\", value: 'P1-Feb2020'}];\n }\n \n let annotations = {},\n site_info = {};\n \n for (let i = 0; i < info.length; i++) {\n annotations[info[i].label] = await d3.json (base_url + info[i].value + \"-summary.json\");\n site_info[info[i].label] = await d3.json (base_url + info[i].value + \"-annotation.json\");\n }\n \n return {\n summary : annotations,\n sites : site_info\n }; \n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":606,"value":"analysis_info = analysis_info_combined.summary","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":340,"value":"signatures= _.map ( [[\"S/18\",0,1,1],[\"S/20\",0,0,1],[\"S/26\",0,0,1],[\"S/80\",0,1,0],[\"S/138\",0,0,1],[\"S/190\",0,0,1],[\"S/215\",0,1,0],[\"S/417\",0,1,1],[\"S/484\",0,1,1],[\"S/501\",1,1,1],[\"S/570\",1,0,0],[\"S/655\",0,0,1],[\"S/681\",1,0,0],[\"S/701\",0,1,0, {'V2' : ['V']}],[\"S/716\",1,0,0],[\"S/982\",1,0,0],[\"S/1027\",0,0,1],[\"S/1118\",1,0,0],[\"S/1176\",0,0,1],[\"ORF1a/265\",0,1,0],[\"ORF1a/1001\",1,0,0],[\"ORF1a/1188\",0,0,1],[\"ORF1a/1655\",0,1,0],[\"ORF1a/1708\",1,0,0],[\"ORF1a/1795\",0,0,1],[\"ORF1a/2230\",1,0,0, {'V1' : ['T']}],[\"ORF1a/3353\",0,1,0, {'V2': ['R']}],[\"ORF1b/1264\",0,0,1],[\"ORF3a/57\",0,1,0],[\"ORF3a/171\",0,1,0],[\"ORF3a/253\",0,0,1, {'V3': [\"P\"]}],[\"E/71\",0,1,0],[\"ORF8/92\",0,0,1],[\"N/3\",1,0,0],[\"N/80\",0,0,1],[\"N/205\",0,1,0],[\"N/235\",1,0,0, {'V1': ['F']}]], (s)=>{return {'site':+jsonCodonLookup[s[0].toUpperCase()],'V1': s[1], 'V2' : s[2], 'V3' : s[3], 'subs' : s[4]}})","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":705,"value":"signatures_subs = _.chain (signatures).filter((s)=>s.subs).map ((d)=>[d.site, d.subs]).fromPairs().value()","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":425,"value":"annotation = _.mapValues (await d3.json (/*'https://raw.githubusercontent.com/veg/SARS-CoV-2/compact/data/comparative-annotation.json'*/\"https://dl.dropboxusercontent.com/s/wz40kx05e2no8tt/annotation.json\"), (d)=>{\n if (d.evo) {\n d.evo = _.chain (d.evo).toPairs().map ((d)=>[translation_table[d[0]], d[1]]).groupBy ((d)=>d[0]).mapValues((v)=>d3.sum (v, (c)=>c[1])).value();\n }\n return d;\n});","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":5,"value":"md`### Libraries`","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":522,"value":"import {legend} from \"@d3/color-legend\"","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":171,"value":"html``","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"},{"id":239,"value":"import {translation_table} from 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(\"lodash\")","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","tool":"$undefined","providerMetadata":"$undefined","attachments":"$undefined","output":"$undefined","database":"$undefined"}],"files":"$W4b","stdlib":"1"}} 24:null