29:null 2a:["$","title",null,{"children":"Conserved Domains Project | Isobel Cobb | Observable"}] 2f:[{"id":"98435aac96ed4b72f1384742513d735993c1ec8cfd38a4f8e97c6845a19340ddfd862d44d2d67513eea45bbc2902668c46122f554414cd25c7fe662ac1492578","href":"https://static.observableusercontent.com/files/98435aac96ed4b72f1384742513d735993c1ec8cfd38a4f8e97c6845a19340ddfd862d44d2d67513eea45bbc2902668c46122f554414cd25c7fe662ac1492578","name":"clusterQdomains.json","type":"application/json","lastModified":1680557693412.364,"size":1462345},{"id":"d199bc31d7b4f6bacb51996118ffa219b6da886520e1b2c7f8c564c40e21acca698672d3eaf5ad620fb54738e861a55a3f5e4a538ff1abd2defef104e8724f5b","href":"https://static.observableusercontent.com/files/d199bc31d7b4f6bacb51996118ffa219b6da886520e1b2c7f8c564c40e21acca698672d3eaf5ad620fb54738e861a55a3f5e4a538ff1abd2defef104e8724f5b","name":"clusterFdomains.json","type":"application/json","lastModified":1680557695053.075,"size":11920170}] 2d:{"id":"63c65b7d6a31d5fc","slug":null,"title":"Conserved Domains Project","thumbnail":"49e3b8e7b5c25c76853ac31b4ed41e895e2facb91573182f4e68e995d0ccb899","access_level":"public","create_time":"$D2023-04-03T21:33:34.735Z","update_time":"$D2023-04-04T03:08:59.709Z","view_time":null,"first_public_time":"$D2023-04-03T21:33:34.735Z","fork":false,"stars":0,"starred":false,"owner":{"type":"team","id":"3e2509283042eb59","login":"icobb","name":"Isobel Cobb","avatar_url":"https://avatars-next.observableusercontent.com/7b05262d8809fccadb2a7d8df2214cd26ac3ad57393de009a985fb8257469bfe","tier":"starter_2024"},"version":232,"publish_version":null,"role":null,"authored":false,"authors":[{"type":"individual","id":"2d6b5bbb66e9af61","login":"icobb","name":"Isobel Cobb","avatar_url":"https://avatars-next.observableusercontent.com/7b05262d8809fccadb2a7d8df2214cd26ac3ad57393de009a985fb8257469bfe","tier":null}],"members":[{"type":"individual","id":"2d6b5bbb66e9af61","login":"icobb","name":"Isobel Cobb","avatar_url":"https://avatars-next.observableusercontent.com/7b05262d8809fccadb2a7d8df2214cd26ac3ad57393de009a985fb8257469bfe","tier":null,"role":"editor"}],"comments":[],"custom_thumbnail":false,"trashed":false,"lapsed":null,"subscribed":null,"forks":0,"collection":null,"type":"notebook","body":{"title":"Conserved Domains Project","cells":[{"id":0,"value":"# Conserved Domains Project","pinned":false,"hidden":false,"mode":"md","author":"$undefined","summary":"$undefined","output":"","database":"$undefined"},{"id":77,"value":"In order to look at the cluster q and f phams and genes, please log into Phamerator below.","pinned":false,"hidden":false,"mode":"md","author":"$undefined","summary":"$undefined","output":"","database":"$undefined"},{"id":23,"value":"viewof formData = {\n let formData = \"Signed In\";\n formData = formWithSubmit(html`\n \n`);\n return formData;\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":34,"value":"# Cluster Q Data","pinned":false,"hidden":false,"mode":"md","author":"$undefined","summary":"$undefined","output":"","database":"$undefined"},{"id":65,"value":"clusterqdomains = FileAttachment(\"clusterQdomains.json\").json()","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":69,"value":"QDomains = clusterqdomains","pinned":true,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"QDomains","database":"$undefined"},{"id":36,"value":"# Cluster F Data\n","pinned":false,"hidden":false,"mode":"md","author":"$undefined","summary":"$undefined","output":"","database":"$undefined"},{"id":57,"value":"clusterfdomains = FileAttachment(\"clusterFdomains.json\").json()","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":70,"value":"FDomains = clusterfdomains","pinned":true,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"FDomains","database":"$undefined"},{"id":110,"value":"# Combined Data Set","pinned":false,"hidden":false,"mode":"md","author":"$undefined","summary":"$undefined","output":"","database":"$undefined"},{"id":112,"value":"clusterQandFdomains = clusterfdomains.concat(clusterqdomains)","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":114,"value":"clusterQandFdomains","pinned":true,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"","database":"$undefined"},{"id":38,"value":"# Gene and Pham Information","pinned":false,"hidden":false,"mode":"md","author":"$undefined","summary":"$undefined","output":"","database":"$undefined"},{"id":42,"value":"clusterQfunctions = getPhameratorData(\"Actino_Draft\", '/functions', user.email, user.password)\n","pinned":true,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":44,"value":"phams = getPhameratorData(\"Actino_Draft\", '/phamilies', user.email, user.password)","pinned":true,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":46,"value":"clusterQgenes = getPhameratorData(\"Actino_Draft\", `/genesbycluster/Q`,\n user.email,\n user.password)","pinned":true,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":52,"value":"clusterQphams = Array.from(new Set(clusterQgenes.map(d => +d.phamName)))","pinned":true,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":48,"value":"clusterFgenes = getPhameratorData(\"Actino_Draft\", `/genesbycluster/F`,\n user.email,\n user.password)","pinned":true,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":50,"value":"clusterFphams = Array.from(new Set(clusterFgenes.map(d => +d.phamName)))","pinned":true,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":83,"value":"# Test\n","pinned":false,"hidden":false,"mode":"md","author":"$undefined","summary":"$undefined","output":"","database":"$undefined"},{"id":93,"value":"viewof search1 = Inputs.search(clusterQandFdomains, { label: \"Search any column\" })","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":101,"value":"Inputs.table(search1, { width: { \"Domain Name\": 100, Function: 350 } })","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":5,"value":"# Appendix","pinned":false,"hidden":false,"mode":"md","author":"$undefined","summary":"$undefined","output":"","database":"$undefined"},{"id":210,"value":"SELECT * \n FROM clusterFgenes\n INNER JOIN clusterfdomains\n ON clusterFgenes.geneID = clusterfdomains.geneID","pinned":true,"hidden":false,"mode":"sql","author":"$undefined","summary":"$undefined","output":"","database":"var:dbTest"},{"id":7,"value":"import {\n terms,\n getPhameratorData,\n user,\n formWithSubmit,\n styles\n} with { formData } from \"@scresawn/phamerator-api-utilities\"","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":12,"value":"import {Plot} from \"@mkfreeman/plot-tooltip\"","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":26,"value":"styles","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":222,"value":"dbTest = DuckDBClient.of({ clusterFgenes, clusterQgenes, clusterfdomains, clusterqdomains, clusterQfunctions, clusterQphams, clusterFphams})","pinned":true,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"}],"files":"$W2f","stdlib":"1","titling":"auto"}} 2e:"$2d:body"

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