25:["$","title",null,{"children":"MAGs Haddock / The Gully paper | Julien Tremblay | Observable"}] 49:Tbe5,chart = { const svg = d3.create("svg") .attr("viewBox", [0, 0, width, height]) svg.append("g") .call(xAxis) //X axis title svg.append("text") .style("font", "16px Calibri") .attr("transform", "translate(" + (width/2) + " ," + (height) + ")") .style("text-anchor", "middle") .text("t-SNE x"); svg.append("g") .call(yAxis) // Y axis title svg.append("text") .style("font", "16px Calibri") .attr("transform", "rotate(-90)") .attr("y",100 - margin.left) .attr("x",0 - (height / 2)) .attr("dy", "1em") .style("text-anchor", "middle") .text("t-SNE y"); let circles = svg.selectAll(".dot") return Object.assign(svg.node(), { update(data2) { const t = svg.transition().duration(750); circles = circles .data(data2, d => d.contig_id) .join( enter => enter.append("circle") .attr("cx", function (d) { return xScale(d.posx); } ) .attr("cy", function (d) { return yScale(d.posy); } ) .style("stroke", "black") .style("stroke-width", 0.5) .style("fill", function(d) {if(colorKey == "gc_perc"){ return zScaleContinuous(d[colorKey]);}else{return zScale(d[colorKey]);}}) .call(circles => circles.transition(t) .attr("r", function (d) { if(circleSize == "byContigSize"){ return (Math.sqrt(d.length)/25);}else{ return 1.5;}})), update => update, exit => exit .call(circles => circles.transition(t).remove() .attr("r", 0)) ) .on('mousemove', nodeMouseOver) .on('mouseout', nodeMouseOut ); } }); /*---------------------------- Tooptip ------------------------------*/ function nodeMouseOver(event, d){ // Get the toolTip, update the position, and append the inner html depending on your content // I tend to use template literal to more easily output variables. toolTip.style("left", event.pageX + 18 + "px") .style("top", event.pageY + 18 + "px") .style("display", "block") .html(`${d.MAG_id}
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