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2d:{"id":"eb97add1778e4e75","slug":null,"title":"EnviDat Dataset Publications","thumbnail":"ab1e639aacf1e291697c8f9c68770f1dea9494a7a393c9de8ea96355267d6b1e","access_level":"public","create_time":"$D2024-03-28T09:58:44.338Z","update_time":"$D2025-04-09T17:55:49.277Z","view_time":null,"first_public_time":"$D2024-03-28T09:58:44.338Z","fork":{"id":"e167adb5834a07cd","slug":"envidat-organization-dataset-overview","title":"EnviDat Dataset Extensive Publication Report","owner":{"id":"e893d779bcd54483","login":"domdomhaas","name":"Dominik Haas"}},"stars":0,"starred":false,"owner":{"type":"team","id":"e893d779bcd54483","login":"domdomhaas","name":"Dominik Haas","avatar_url":"https://avatars-next.observableusercontent.com/c15b32c72c2339b879c55ab6440be3d5001fb27a749eded6b6e8b4f240687b1a","tier":"starter_2024"},"version":1165,"publish_version":null,"role":null,"authored":false,"authors":[{"type":"individual","id":"bc1a500ffc26e982","login":"domdomhaas","name":"Dominik 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Publications","pinned":false,"hidden":false,"mode":"md","author":"$undefined","summary":"$undefined","output":"","database":"$undefined"},{"id":1060,"value":"
\n## Dataset Publications\n
\nHere is an overview of all datasets in EnviDat based on their publication year.","pinned":false,"hidden":false,"mode":"md","author":"$undefined","summary":"$undefined","output":"","database":"$undefined"},{"id":408,"value":"html`\n

\n`","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":26,"value":"md `
\n## EnviDat Organization Data\nHere follows the technicals, conversion and restructing of the data to make the charts possible.`","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":393,"value":"organizationNames = {\n const file = await FileAttachment(\"organizationNames.json\").json();\n return file.result;\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":363,"value":"async function getOrganizationData() {\n const data = [];\n \n for (let i = 0; i < organizationNames.length; ++i) {\n const name = organizationNames[i];\n const url = `http://envidat.ch/api/action/organization_show?id=${name}&include_groups=true&include_extras=true`;\n const orgaData = await fetch(url);\n console.log(orgaData);\n // data.push(orgaData);\n }\n \n return data;\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":390,"value":"datasets = {\n const file = await FileAttachment(\"packagelist_2025-04-08_01-04-53.json\").json();\n return file.result;\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":832,"value":"ruDatasets = {\n const ruDatasets = [];\n \n for (let i = 0; i < datasets.length; ++i) {\n const dSet = datasets[i];\n \n const orgaName = dSet.organization.title;\n dSet.ruName = getResearchUnit(orgaName);\n // console.log(`orgaName: ${orgaName} ruName: ${dSet.ruName}`)\n\n ruDatasets.push(dSet);\n }\n\n return ruDatasets;\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":414,"value":"currentYearsSeries = {\n\n const currentYearStr = currentYear.toString();\n const lastYearStr = lastYear.toString();\n\n const currentDatasets = datasetsYearMap.get(currentYearStr);\n const lastDatasets = datasetsYearMap.get(lastYearStr);\n\n const series = [{\n name: lastYearStr,\n data: [lastDatasets.length]\n }, {\n name: currentYearStr,\n data: [currentDatasets.length]\n }];\n \n /*\n const series = [{\n category: lastYearStr,\n x: lastYearStr,\n y: lastDatasets.length\n }, {\n category: currentYearStr,\n x: currentYearStr,\n y: currentDatasets.length\n }]; \n */\n return series;\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":421,"value":"datasetsYearMap = getYearDatasetMap(datasets);","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":484,"value":"function getYearDatasetMap(datasets) {\n\n const yearMap = new Map();\n\n for (const dSet of datasets) {\n\n console.log(dSet.publication);\n let year = dSet.publication?.publication_year;\n\n if (typeof dSet.publication === 'string') {\n year = JSON.parse(dSet.publication).publication_year;\n }\n\n if (year !== '2015') {\n if (yearMap.has(year)) {\n const dList = yearMap.get(year);\n dList.push(dSet);\n } else {\n yearMap.set(year, [dSet]);\n }\n }\n }\n \n return yearMap;\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":838,"value":"ruMap = {\n const oMap = new Map();\n \n for (let i = 0; i < ruDatasets.length; ++i) {\n const dSet = ruDatasets[i];\n\n const key = dSet.ruName\n\n if (oMap.has(key)) {\n const entry = oMap.get(key);\n const merged = {\n count: entry.count + 1,\n datasets: [...entry.datasets, ...[dSet]],\n }\n\n oMap.set(key, merged);\n } else {\n oMap.set(key, {\n count: 1,\n datasets: [dSet],\n }); \n }\n \n }\n\n const keys = oMap.keys();\n \n for (const k of keys) {\n const orga = oMap.get(k);\n const orgaDatasets = orga.datasets;\n orga.yearMap = getYearDatasetMap(orgaDatasets);\n }\n\n return oMap;\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":85,"value":"orgaMap = {\n const oMap = new Map();\n \n for (let i = 0; i < datasets.length; ++i) {\n const dSet = datasets[i];\n\n const key = dSet.organization.title;\n\n if (oMap.has(key)) {\n const entry = oMap.get(key);\n const merged = {\n count: entry.count + 1,\n datasets: [...entry.datasets, ...[dSet]],\n }\n\n oMap.set(key, merged);\n } else {\n oMap.set(key, {\n count: 1,\n datasets: [dSet],\n }); \n }\n \n }\n\n const keys = oMap.keys();\n \n for (const k of keys) {\n const orga = oMap.get(k);\n const orgaDatasets = orga.datasets;\n orga.yearMap = getYearDatasetMap(orgaDatasets);\n }\n\n return oMap;\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":822,"value":"researchUnits = FileAttachment(\"researchUnits@1.json\").json();","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":826,"value":"function getResearchUnit(orgaName) {\n const units = researchUnits.researchUnits;\n\n for (let i = 0; i < units.length; ++i) {\n const unit = units[i];\n const ruName = unit.name;\n const ruNameLower = unit.name.toLowerCase();\n\n if (ruNameLower.includes(orgaName.toLowerCase())) {\n return ruName;\n }\n\n if (unit.groups.length > 0) {\n const groups = unit.groups;\n \n for (let j = 0; j < groups.length; ++j) {\n const groupName = groups[j].toLowerCase();\n\n if (groupName.includes(orgaName.toLowerCase())) {\n return ruName;\n }\n }\n }\n \n }\n\n return others;\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":499,"value":"yearRuMap = {\n const yearRuMap = new Map();\n\n const keys = ruMap.keys();\n \n for (const orgaName of keys) {\n const orga = ruMap.get(orgaName);\n const yearMap = orga.yearMap;\n\n const yearKeys = yearMap.keys();\n \n for (const year of yearKeys) {\n\n const datasetsInYear = yearMap.get(year);\n \n if (yearRuMap.has(year)) {\n const subOrgaMap = yearRuMap.get(year);\n subOrgaMap.set(orgaName, datasetsInYear); \n /*\n if (subOrgaMap.has(orgaName)) {\n \n } else {\n }\n */\n } else {\n \n const subOrgaMap = new Map();\n subOrgaMap.set(orgaName, datasetsInYear);\n \n yearRuMap.set(year, subOrgaMap);\n } \n }\n \n }\n \n return yearRuMap;\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":40,"value":"md `## Chart code`","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":730,"value":"md `#### Overall historical bar chart`","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":529,"value":" yearCategories = {\n const yearCategories = [];\n const data = yearAmountSeries[0].data;\n for (const entry of data) {\n yearCategories.push(entry[0]);\n }\n return yearCategories;\n }","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":503,"value":"yearAmountSeries = {\n const data = [];\n\n for (const [year, datasets] of datasetsYearMap) {\n\n data.push([\n year,\n datasets.length,\n ]);\n /*\n data.push({\n name: year,\n data: [datasets.length],\n });\n */\n }\n\n data.sort((a, b) => { \n return Number.parseInt(a[0]) > Number.parseInt(b[0]) ? 1 : -1\n });\n\n return [{\n name: 'Publications per year',\n data,\n color: colorPlaette[0],\n }];\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":410,"value":"yearsBarChart = {\n await Highcharts_theme;\n\n\n const chartTitle = `EnviDat Dataset Publications`;\n \n const chartOpt = {\n chart: {\n type: 'column'\n },\n title: {\n text: chartTitle\n },\n\n legend: {\n enabled: false\n },\n \n xAxis: {\n type: 'category',\n categories: yearCategories,\n labels: {\n // useHTML: true,\n style: {\n textAlign: 'center'\n }\n }\n }, \n yAxis: {\n title: {\n text: 'Datasets published'\n },\n tickAmount: 6,\n },\n \n plotOptions: {\n series: {\n grouping: false,\n borderWidth: 0,\n dataLabels: [{\n enabled: true,\n inside: true,\n style: {\n fontSize: '14px'\n }\n }],\n } \n },\n\n series: yearAmountSeries,\n };\n \n Highcharts.chart('yearBarChart', chartOpt );\n}\n","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":740,"value":"md `#### Overall historical line chart`","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":203,"value":"timelineData = getSortedTimestamps(datasets);","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":173,"value":"timeLineSeries = {\n // https://www.highcharts.com/demo/line-basic/sand-signika\n\n const data = [];\n \n for (let j = 0; j < timelineData.length; ++j) {\n const timestamp = timelineData[j];\n // const time = Date.parse(dSet.metadata_created);\n const time = new Date(timestamp).toISOString();\n data.push({ x: timestamp, y: j, time });\n }\n\n return [{\n name: 'Datasets Timeline',\n data,\n color: colorPlaette[2],\n }];\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":733,"value":"md `#### Historical research unit bar chart`","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":494,"value":"ruYearSeries = {\n \n const series = [];\n const keys = Array.from(ruMap.keys());\n\n for (const [orgaName, value] of ruMap) {\n const index = keys.indexOf(orgaName);\n const data = [];\n \n const yearMap = value.yearMap;\n\n for (const year of yearCategories) {\n const amount = yearMap.get(year)?.length || 0;\n data.push(amount);\n }\n\n series.push({\n name: orgaName,\n data,\n color: ruBarColors[index],\n /*\n dataSorting: {\n enabled: true,\n matchByName: true\n },\n */\n }); \n }\n\n return series;\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":736,"value":"md `#### Current year research unit pie chart`","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":631,"value":"totalCurrentYearDatasets = {\n const currentOrgas = yearRuMap.get(currentYear);\n\n let count = 0;\n \n if (currentOrgas) {\n for (const [orgaName, datasets] of currentOrgas) {\n count += datasets.length;\n }\n }\n\n return count;\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":624,"value":"currentYearSeries = {\n const currentOrgas = yearRuMap.get(currentYear);\n\n const data = [];\n\n if (currentOrgas) {\n for (const [orgaName, datasets] of currentOrgas) {\n\n if (orgaName !== others) {\n data.push({\n name: orgaName,\n y: datasets.length,\n });\n }\n }\n }\n\n data.sort((a, b) => a.y > b.y);\n\n return [{\n name: 'Research Units',\n data,\n }];\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":946,"value":"currentYearOthersSeries= {\n const currentOrgas = yearRuMap.get(currentYear);\n\n const currentOthersDatasets = currentOrgas.get(others);\n const data = [];\n\n for (const dSet of currentOthersDatasets) {\n\n const orgaName = dSet.organization.title;\n \n data.push({\n name: orgaName,\n y: 1,\n });\n }\n\n data.sort((a, b) => a.y > b.y);\n\n return [{\n name: 'Non Research Units',\n data,\n }];\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":976,"value":"currentYearDrillDownSeries = {\n const currentOrgas = yearRuMap.get(currentYear);\n\n const data = [];\n const groups = [];\n\n for (const [ruName, datasets] of currentOrgas) {\n\n data.push({\n name: ruName,\n y: datasets.length,\n drilldown: ruName,\n });\n\n const groupMap = new Map();\n \n for (let i = 0; i < datasets.length; ++i) {\n const orgaName = datasets[i].organization.title;\n\n let count = groupMap.get(orgaName) || 0;\n\n count += 1;\n\n groupMap.set(orgaName, count);\n }\n\n const groupData = [];\n \n for (const [orgaName, count] of groupMap) {\n\n groupData.push([\n orgaName,\n count,\n ]);\n \n }\n \n groups.push({\n name: ruName,\n id: ruName,\n data: groupData,\n innerSize: '60%',\n });\n \n } \n\n data.sort((a, b) => a.y > b.y);\n\n return {\n series: [{\n name: 'Research Units',\n data,\n innerSize: '60%', \n\n }],\n drilldown: {\n series: groups,\n },\n };\n \n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":430,"value":"currentYear = {\n const [day, month, year ] = dateToday.split('.');\n return year;\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":442,"value":"lastYear = {\n const currentYearNum = Number.parseInt(currentYear);\n return (currentYearNum - 1).toString();\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":246,"value":"dateToday = {\n const options = { \n day: '2-digit',\n month: '2-digit', \n year: 'numeric', \n };\n\n return new Date().toLocaleDateString('de-de', options);\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":287,"value":"function getSortedTimestamps(datasets) {\n const data = [];\n\n for (let j = 0; j < datasets.length; ++j) {\n const dSet = datasets[j];\n const time = Date.parse(dSet.metadata_created);\n // const time = dSet.metadata_created;\n \n data.push(time);\n }\n\n data.sort();\n \n return data;\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":5,"value":"md `### Script imports`","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":939,"value":"others = 'Others';","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":890,"value":"ruBarColors = {\n const barColors = [\n \"#874540\",\"#954D59\",\"#9C5A74\",\"#9B6A90\",\"#907DA8\",\"#7D92BC\",\"#62A5C7\",\"#45B8C8\",\"#38C9C1\",\"#4DD8B1\",\"#75E59C\",\"#A3EF86\",\"#D5F673\"\n// \"#3F1D1E\",\"#512933\",\"#5E374A\",\"#644964\",\"#635D7D\",\"#597392\",\"#4989A2\",\"#369FA9\",\"#31B4A9\",\"#4AC8A0\",\"#72DA92\",\"#A1E981\",\"#D5F673\"\n// \"#F0807D\",\"#F3859B\",\"#ED90B8\",\"#DC9ED3\",\"#C2AFE7\",\"#A0C0F3\",\"#7ACFF4\",\"#57DCEC\",\"#49E6DA\",\"#5CEEC1\",\"#81F3A6\",\"#ABF68B\",\"#D6F675\" \n];\n return barColors.reverse();\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":588,"value":"colorPlaette = ['#26a69a',\n'#4cb4a8',\n'#69c3b7',\n'#83d1c6',\n'#9cdfd5',\n'#b4eee5']","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":17,"value":"Highcharts = require('https://bundle.run/highcharts@9.3.3')\n","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":20,"value":"Highcharts_theme = {\n await Highcharts;\n await importjs(\"https://bundle.run/highcharts@9.3.3/themes/sand-signika.js\");\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":67,"value":"HighchartsExporting = {\n // importjs(\"https://cdn.jsdelivr.net/npm/highcharts@10.0.0/modules/exporting.js\",\"window.export-data\");\n // importjs(\"https://code.highcharts.com/modules/export-data.js\",\"window.export-data\");\n importjs(\"https://code.highcharts.com/modules/exporting.js\",\"window.exporting\");\n importjs(\"https://code.highcharts.com/modules/export-data.js\",\"window.export-data\"); \n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":11,"value":"$$ = require(\"https://code.jquery.com/jquery-3.3.1.js\")","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":22,"value":"importjs = function(src,targetvar) {\n /*if (!$(\"head\").find(`script[src=\"${src}\"]`)) {\n $(\"head\").append(``);\n }*/\n return new Promise(function(resolve,reject) {\n function waitForFoo(){\n if (typeof targetvar == \"undefined\") resolve();\n if (eval(targetvar)) resolve(eval(targetvar));\n setTimeout(waitForFoo, 30);\n };\n\n require(src).then(function(){\n waitForFoo();\n }).catch(function() {\n waitForFoo();\n });\n });\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"},{"id":8,"value":"importcss = function(src) {\n $(\"head\").append(``)\n}","pinned":false,"hidden":false,"mode":"ojs","author":"$undefined","summary":"$undefined","output":"$undefined","database":"$undefined"}],"files":"$W2f","stdlib":"1","titling":"auto"}} 2e:"$2d:body"