The avatar for @spond
Sergei Pond
Published
Edited
May 29, 2020
Fork of SRRs with many mid-range variants (multiple infections)?
•
1 fork
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ag_omega_vs_freq = vegalite({
"title": null,
data: {values: _.filter(_.map (aggregated_omega_freq, (d,k)=> [k,(d.N/d.S)/(d.EN/d.ES)]), (f)=>f[0] != "0")},

layer: [{
width : 400,
height: 400,

"mark": {
"type": "point",
"filled" : true,
clip : true
},
"encoding": {
"size" : {"value" : 100},
"x": {
field: "0",
"title" : "Variant Frequency",
type: "ordinal",
"scale" : {"type": "ordinal", "domain" : ["1","2","3","4","5","6","7-10","11-20","21-3000",">3000"]}
},

"y": {"field": "1", "type": "quantitative", axis: {
"title" : "dN/dS",
axis: null,
"grid" : false,
},

"scale": {
"type": "linear",
}},
}
}]

})
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