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Steven Weaver

stevenweaver.org

Public notebooks

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COVFEFE HyPhy Simulation Flowchart This notebook is a fork
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Steven Weaver
Jun 2
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Datamonkey Comprehensive Usage 2024 This notebook is a fork
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Steven Weaver
May 10
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HCV Flowchart This notebook is a fork
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Steven Weaver
Apr 25
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AUTO-TUNE Scoring Heuristic Flowchart
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Steven Weaver
Apr 25
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NGS Copy Diversity with Phylotree 1.0.0 This notebook is a fork
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Steven Weaver
Mar 12
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HyPhy Benchmarks
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Steven Weaver
Feb 1
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AUTO-TUNE
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Steven Weaver
Jan 16
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aBSREL analysis result visualization This notebook is a fork
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Steven Weaver
Dec 18, 2023
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aBSREL analysis result visualization This notebook is a fork
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Steven Weaver
Dec 18, 2023
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Edge Filtering Report
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Steven Weaver
Oct 18, 2023
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Datamonkey Comprehensive Usage 2023 This notebook is a fork
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Steven Weaver
Sep 6, 2023
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Datamonkey Comprehensive Usage 2022 This notebook is a fork
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Steven Weaver
Sep 6, 2023
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Datamonkey Usage Over Time
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Steven Weaver
Sep 6, 2023
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Datamonkey SARS-CoV-2 Usage 2021
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Steven Weaver
Aug 24, 2023
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Hardware
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Steven Weaver
Aug 23, 2023
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Phylotree 1.0.0 -- Unscaled IAV HA colored by host This notebook is a fork
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Steven Weaver
Aug 9, 2023
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MeV Gantt Chart This notebook is a fork
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Steven Weaver
Jul 31, 2023
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AWS Gantt Chart
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Steven Weaver
Jul 31, 2023
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Phylotree 1.0.0 with Thick Branches This notebook is a fork
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Steven Weaver
Jan 26, 2023
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SARS-CoV-2 Coordinate Map
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Steven Weaver
Oct 27, 2022
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Parse FASTA
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Steven Weaver
Mar 30, 2020
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ARGOS NGS-QC
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Steven Weaver
Jul 29, 2022
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PANGOLIN Clade Counts
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Steven Weaver
Sep 1, 2021
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Internal Node Labels with Phylotree This notebook is a fork
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Steven Weaver
Aug 31, 2021
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Phylotree 1.0.0 -- Unscaled IAV HA colored by host This notebook is a fork
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Steven Weaver
Jan 26, 2023•2
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NGS Copy Diversity with Phylotree 1.0.0 This notebook is a fork
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Steven Weaver
May 24, 2021
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Phylotree 1.0.0 -- HIV RT This notebook is a fork
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Steven Weaver
May 10, 2021
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MULTI-HIT analysis result visualization This notebook is a fork
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Steven Weaver
Mar 11, 2021
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Tracking signature mutations in SARS-CoV-2 relative to the inferred progenitor strain This notebook is a fork
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Steven Weaver
Jan 15, 2021
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Displaying aBSREL results using branch "censoring" This notebook is a fork
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Steven Weaver
Jan 5, 2021
Showing 1-30 of 55 notebooks
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