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Edited
Jun 10, 2019
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myChart={
const div = html`<div style='max-width: 900px; overflow-x: auto; padding: 0px; margin: 0px;'></div>`;
const svg = d3.select(div)
.append("svg")
.attr("width", width + margin.left + margin.right)
.attr("height", height + margin.top + margin.bottom)
.append("g")
.attr("transform", `translate(${margin.left},${margin.top})`);
const subgraphWidth = width*2/8;
const subgraphHeight = height*1/5;

const subgraph = svg.append("g")
.attr("id", "subgraph")
.attr("transform", `translate(${width - subgraphWidth - 20}, 0)`);
subgraph.append("text")
.style("font-size","16px")
//appending little triangles, path object, as arrowhead
//The <defs> element is used to store graphical objects that will be used at a later time
//The <marker> element defines the graphic that is to be used for drawing arrowheads or polymarkers on a given <path>, <line>, <polyline> or <polygon> element.
svg.append('defs').append('marker')
.attr("id",'arrowhead')
.attr('viewBox','-0 -5 10 10') //the bound of the SVG viewport for the current SVG fragment. defines a coordinate system 10 wide and 10 high starting on (0,-5)
.attr('refX',24) // x coordinate for the reference point of the marker. If circle is bigger, this need to be bigger.
.attr('refY',0)
.attr('orient','auto')
.attr('markerWidth',6)
.attr('markerHeight',6)
.attr('xoverflow','visible')
.append('svg:path')
.attr('d', 'M 0,-5 L 10 ,0 L 0,5')
.attr('fill', '#999')
.style('stroke','none');
svg.append("text")
.text("Robot Components")
.attr("text-anchor","middle")
.attr("x",width/2)
.style("font-size","20px")
//create some data
const dataset = {
nodes: [
{id: 1, name: 'AGGR', label: 'Aggregation', group: 'Team C', runtime: 20, category:2},
{id: 2, name: 'ASMT', label: 'Assessment Repository', group: 'Team A', runtime: 60 ,category:1},
{id: 3, name: 'CALC', label: 'Final Calc', group: 'Team C', runtime: 30 ,category:3},
{id: 4, name: 'DEMO', label: 'Demographic', group: 'Team B', runtime: 40 ,category:1},
{id: 5, name: 'ELIG', label: 'Eligibility', group: 'Team B', runtime: 20 ,category:2},
{id: 6, name: 'GOAL', label: 'Goal Setting', group: 'Team C', runtime: 60 ,category:2},
{id: 7, name: 'GROW', label: 'Growth Model', group: 'Team C', runtime: 60 ,category:2},
{id: 8, name: 'LINK', label: 'Linkage', group: 'Team A', runtime: 100 ,category:1},
{id: 9, name: 'MOSL', label: 'MOSL', group: 'Team A', runtime: 80 ,category:2},
{id: 10, name: 'MOTP', label: 'MOTP', group: 'Team A', runtime: 20 ,category:1},
{id: 11, name: 'REPT', label: 'Reporting', group: 'Team E', runtime: 240 ,category:4},
{id: 12, name: 'SEDD', label: 'State Data', group: 'Team A', runtime: 30 ,category:1},
{id: 13, name: 'SNAP', label: 'Snapshot', group: 'Team A', runtime: 40 ,category:0}
],
links: [
{source: 1, target: 3, type: 'Next -->>'},
{source: 6, target: 1, type: 'Next -->>'},
{source: 7, target: 1, type: 'Next -->>'},
{source: 9, target: 1, type: 'Next -->>'},
{source: 2, target: 4, type: 'Next -->>'},
{source: 2, target: 6, type: 'Next -->>'},
{source: 2, target: 7, type: 'Next -->>'},
{source: 2, target: 8, type: 'Next -->>'},
{source: 2, target: 9, type: 'Next -->>'},
{source: 10, target: 3, type: 'Next -->>'},
{source: 3, target: 11, type: 'Next -->>'},
{source: 8, target: 5, type: 'Go to ->>'},
{source: 8, target: 11, type: 'Go to ->>'},
{source: 6, target: 9, type: 'Go to ->>'},
{source: 7, target: 9, type: 'Go to ->>'},
{source: 8, target: 9, type: 'Go to ->>'},
{source: 9, target: 11, type: 'Go to ->>'},
{source: 12, target: 9, type: 'Go to ->>'},
{source: 13, target: 11, type: 'Go to ->>'},
{source: 13, target: 2, type: 'Go to ->>'},
{source: 13, target: 4, type: 'This way>>'},
{source: 13, target: 5, type: 'This way>>'},
{source: 13, target: 8, type: 'This way>>'},
{source: 13, target: 9, type: 'This way>>'},
{source: 13, target: 10, type: 'This way>>'},
{source: 4, target: 7, type: 'Next -->>'},
{source: 10, target: 5, type: 'Next -->>'},
{source: 4, target: 2, type: 'Next -->>'},
{source: 5, target: 3, type: 'Next -->>'}
]
};

console.log("dataset is ...",dataset);
// Initialize the links
const link = svg.selectAll(".links")
.data(dataset.links)
.enter()
.append("line")
.attr("class", "links")
.attr("stroke","#999")
.attr("stroke-width","2px")
.style("opacity", 0.8)
.attr("id",d=> "line"+d.source+d.target)
.attr("class", "links")
.attr('marker-end','url(#arrowhead)') //The marker-end attribute defines the arrowhead or polymarker that will be drawn at the final vertex of the given shape.


//The <title> element provides an accessible, short-text description of any SVG container element or graphics element.
//Text in a <title> element is not rendered as part of the graphic, but browsers usually display it as a tooltip.
link.append("title")
.text(d => d.type);

const edgepaths = svg.selectAll(".edgepath") //make path go along with the link provide position for link labels
.data(dataset.links)
.enter()
.append('path')
.attr('class', 'edgepath')
.attr('fill-opacity', 0)
.attr('stroke-opacity', 0)
.attr('id', function (d, i) {return 'edgepath' + i})
.style("pointer-events", "none");

const edgelabels = svg.selectAll(".edgelabel")
.data(dataset.links)
.enter()
.append('text')
.style("pointer-events", "none")
.attr('class', 'edgelabel')
.attr('id', function (d, i) {return 'edgelabel' + i})
.attr('font-size', 10)
.attr('fill', '#aaa');

edgelabels.append('textPath') //To render text along the shape of a <path>, enclose the text in a <textPath> element that has an href attribute with a reference to the <path> element.
.attr('xlink:href', function (d, i) {return '#edgepath' + i})
.style("text-anchor", "middle")
.style("pointer-events", "none")
.attr("startOffset", "50%")
.text(d => d.type);
// Initialize the nodes
const node = svg.selectAll(".nodes")
.data(dataset.nodes)
.enter()
.append("g")
.attr("class", "nodes")

var yCenter = [height/8, height*2/6, height*3/6, height*4/6, height*7/8];
var simulation = d3.forceSimulation()
.force("link", d3.forceLink()
.id(d => d.id)
.distance(150)
)
.force("charge", d3.forceManyBody().strength(-700)) // This adds repulsion (if it's negative) between nodes.
// .force("center", d3.forceCenter(width / 2, height / 2)) // This force attracts nodes to the center of the svg area
.force('y',d3.forceY().y(function(d){
return yCenter[d.category]
}).strength(0.5))
.force('x',d3.forceX().x(function(d){
return width/2
}).strength(0.1))
.force('collision', d3.forceCollide().radius(function(d) {
return 17+d.runtime/10;
}))
node.call(d3.drag() //sets the event listener for the specified typenames and returns the drag behavior.
.on("start", dragstarted) //start - after a new pointer becomes active (on mousedown or touchstart).
.on("drag", dragged) //drag - after an active pointer moves (on mousemove or touchmove).
);

node.append("circle")
.attr("r", d=> 17)//+ d.runtime/20 )
.attr("id",d=> "circle"+d.id)
.style("stroke", "grey")
.style("stroke-opacity",0.3)
.style("stroke-width", d => d.runtime/10)
.style("fill", d => colorScale(d.group))

node.append("title")
.text(d => d.id + ": " + d.label + " - " + d.group +", runtime:"+ d.runtime+ "min");

node.append("text")
.attr("dy", 4)
.attr("dx", -15)
.text(d => d.name);
node.append("text")
.attr("dy",12)
.attr("dx", -8)
.text(d=> d.runtime);

//set up dictionary of neighbors
var neighborTarget= {};
for (var i=0; i < dataset.nodes.length; i++ ){
var id = dataset.nodes[i].id;
neighborTarget[id] = dataset.links.filter(function(d){
return d.source == id;
}).map(function(d){
return d.target;
})
}
var neighborSource = {};
for (var i=0; i < dataset.nodes.length; i++ ){
var id = dataset.nodes[i].id;
neighborSource[id] = dataset.links.filter(function(d){
return d.target == id;
}).map(function(d){
return d.source;
})
}
console.log("neighborSource is ",neighborSource);
console.log("neighborTarget is ",neighborTarget);
node.selectAll("circle").on("click",function(d){

var active = d.active? false : true // toggle whether node is active
, newStroke = active ? "yellow":"grey"
, newStrokeIn = active ? "green":"grey"
, newStrokeOut = active? "red": "grey"
, newOpacity = active? 0.6: 0.3
, subgraphOpacity = active? 0.9:0;

subgraph.selectAll("text")
.text("Selected: " +d.label)
.attr("dy",14)
.attr("dx",14)

//extract node's id and ids of its neighbors
var id =d.id
, neighborS = neighborSource[id]
, neighborT = neighborTarget[id];
console.log("neighbors is from ",neighborS," to ", neighborT);
d3.selectAll("#circle"+id).style("stroke-opacity", newOpacity);
d3.selectAll("#circle"+id).style("stroke", newStroke);
d3.selectAll("#subgraph").style("opacity",subgraphOpacity)

//highlight the current node and its neighbors
for (var i =0; i < neighborS.length; i++){
d3.selectAll("#line"+neighborS[i]+id).style("stroke", newStrokeIn);
d3.selectAll("#circle"+neighborS[i]).style("stroke-opacity", newOpacity).style("stroke", newStrokeIn);
}
for (var i =0; i < neighborT.length; i++){
d3.selectAll("#line"+id+neighborT[i]).style("stroke", newStrokeOut);
d3.selectAll("#circle"+neighborT[i]).style("stroke-opacity", newOpacity).style("stroke", newStrokeOut);
}
//update whether or not the node is active
d.active =active;
})

//Listen for tick events to render the nodes as they update in your Canvas or SVG.
simulation
.nodes(dataset.nodes)
.on("tick", ticked);

simulation.force("link")
.links(dataset.links);


// This function is run at each iteration of the force algorithm, updating the nodes position (the nodes data array is directly manipulated).
function ticked() {
link.attr("x1", d => d.source.x)
.attr("y1", d => d.source.y)
.attr("x2", d => d.target.x)
.attr("y2", d => d.target.y);

node.attr("transform", d => `translate(${d.x},${d.y})`);

edgepaths.attr('d', d => 'M ' + d.source.x + ' ' + d.source.y + ' L ' + d.target.x + ' ' + d.target.y);
}

//When the drag gesture starts, the targeted node is fixed to the pointer
//The simulation is temporarily “heated” during interaction by setting the target alpha to a non-zero value.
function dragstarted(d) {
if (!d3.event.active) simulation.alphaTarget(0.3).restart();//sets the current target alpha to the specified number in the range [0,1].
d.fy = d.y; //fx - the node’s fixed x-position. Original is null.
d.fx = d.x; //fy - the node’s fixed y-position. Original is null.
}

//When the drag gesture starts, the targeted node is fixed to the pointer
function dragged(d) {
d.fx = d3.event.x;
d.fy = d3.event.y;
}
//drawing the legend
const legend_g = svg.selectAll(".legend")
.data(colorScale.domain())
.enter().append("g")
.attr("transform", (d, i) => `translate(${width},${i * 20})`);

legend_g.append("circle")
.attr("cx", 0)
.attr("cy", 0)
.attr("r", 5)
.attr("fill", colorScale);

legend_g.append("text")
.attr("x", 10)
.attr("y", 5)
.text(d => d);
//drawing the second legend
const legend_g2 = svg.append("g")
//.attr("transform", (d, i) => `translate(${width},${i * 20})`);
.attr("transform", `translate(${width}, 120)`);
legend_g2.append("circle")
.attr("r", 5)
.attr("cx", 0)
.attr("cy", 0)
.style("stroke", "grey")
.style("stroke-opacity",0.3)
.style("stroke-width", 15)
.style("fill", "black")
legend_g2.append("text")
.attr("x",15)
.attr("y",0)
.text("long runtime");
legend_g2.append("circle")
.attr("r", 5)
.attr("cx", 0)
.attr("cy", 20)
.style("stroke", "grey")
.style("stroke-opacity",0.3)
.style("stroke-width", 2)
.style("fill", "black")
legend_g2.append("text")
.attr("x",15)
.attr("y",20)
.text("short runtime");
return div
}
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