mainTitle = metricsMeta[pathogenToShow].mainTitle
tempchart = plotOverview("Oceanside", params)
params = ({
cutoffdate: smoothingTypes[selectedSmoothing].cutoffdate,
ndlimit: -.0000001,
showdetailtooltip: false})
metrics = [pathogenToShow]
metricsAvailable = [
"Influenza_A_PMMoV",
"Influenza_B_PMMoV",
"RSV_PMMoV",
"Noro_G2_PMMoV",
"HMPV_4_PMMoV",
"MPXV_Combined_PMMoV",
"InfA_H5_PMMoV",
"Rota_PMMoV",
"EVD68_PMMoV",
"HPIV_PMMoV",
"C_auris_PMMoV",
"HAV_PMMoV",
"InfA_H1_PMMoV",
"InfA_H3_PMMoV",
]
gridlineColor = "#742fa8"
metricsAvailable
metricsMeta = ({
MPXV_Combined_PMMoV: {
label: "MPXV",
color: gridlineColor,
mainTitle:
"Tracking the quantity of a gene in the MPXV virus",
ylabel: "Quantity of DNA, normalized"
},
Influenza_A_PMMoV: { label: "Influenza_A",
color: gridlineColor,
mainTitle:
"Tracking the quantity of a gene in the influenza A virus",
ylabel: "Quantity of RNA, normalized"
},
Influenza_B_PMMoV: {
label: "Influenza_B",
color: gridlineColor,
mainTitle: "Tracking the quantity of a gene in the influenza B virus",
ylabel: "Quantity of B RNA, normalized"
},
Noro_G2_PMMoV: {
label: "Norovirus",
color: gridlineColor,
mainTitle: "Tracking the quantity of a gene in norovirus",
ylabel: "Quantity of RNA, normalized"
},
RSV_PMMoV: { label: "RSV",
color: gridlineColor,
mainTitle: "Tracking the quantity of a gene in RSV",
ylabel: "Quantity of RNA, normalized"
},
HMPV_4_PMMoV: {label: "human metapneumovirus",
color: gridlineColor,
mainTitle:"Tracking the quantity of a gene in human metapneumovirus",
ylabel: "Quantity of RNA, normalized"
},
InfA_H5_PMMoV: {label: "H5N1",
color: gridlineColor,
mainTitle:"Tracking the quantity of a gene in H5N1",
ylabel: "Quantity of RNA, normalized"
},
Rota_PMMoV: {label: "Rotavirus",
color: gridlineColor,
mainTitle:"Tracking the quantity of a gene in Rotavirus",
ylabel: "Quantity of RNA, normalized"
},
EVD68_PMMoV: {label: "Enterovirus-D68",
color: gridlineColor,
mainTitle:"Tracking the quantity of a gene in Enterovirus-D68",
ylabel: "Quantity of RNA, normalized"
},
HPIV_PMMoV: {label: "Human parainfluenza",
color: gridlineColor,
mainTitle:"Tracking the quantity of a gene in Human parainfluenza",
ylabel: "Quantity of RNA, normalized"
},
C_auris_PMMoV: {label: "Candida auris",
color: gridlineColor,
mainTitle:"Tracking the quantity of a gene in Candida auris",
ylabel: "Quantity of RNA, normalized"
},
HAV_PMMoV: {label: "Hepatitis A",
color: gridlineColor,
mainTitle:"Tracking the quantity of a gene in Hepatitis A",
ylabel: "Quantity of RNA, normalized"
},
InfA_H1_PMMoV: {label: "Influenza A H1",
color: gridlineColor,
mainTitle:"Tracking the quantity of a gene in Influenza A H1",
ylabel: "Quantity of RNA, normalized"
},
InfA_H3_PMMoV: {label: "Influenza A H3",
color: gridlineColor,
mainTitle:"Tracking the quantity of a gene in Influenza A H3",
ylabel: "Quantity of RNA, normalized"
},
})
smoothingTypes = ({
'none': {
smoothing: "",
label: "none: daily sampling",
cutoffdate: "2025-01-01"
},
'smoothed': {
smoothing: "_trimmed5",
label: "smoothed: 5-day trimmed centered mean",
cutoffdate: "2020-01-01"
}
})
ylabel = metricsMeta[pathogenToShow].ylabel
smoothing = smoothingTypes[selectedSmoothing].smoothing
Purpose-built for displays of data
Observable is your go-to platform for exploring data and creating expressive data visualizations. Use reactive JavaScript notebooks for prototyping and a collaborative canvas for visual data exploration and dashboard creation.
