Human Immune Monitoring Center at Mount Sinai
Published
Edited
Apr 23, 2020
gene_list = [
'ATP5F1', 'ACE2', 'CLASP1', 'INSR1', 'PHF14', 'RBM3', 'MSL1', 'PHF21A', 'ARL10', 'INSR', 'JADE2', 'P2RX7'
]
// 'PHF14', 'RBM3', 'MSL1', 'PHF21A', 'ARL10', 'INSR', 'JADE2', 'P2RX7',
// 'LINC00662', 'CCDC101', 'PPM1B', 'KANSL1L', 'CRYZL1', 'ANAPC16', 'TMCC1',
// 'CDH8', 'RBM11', 'CNPY2', 'HSPA1L', 'CUL2', 'PLBD2', 'LARP7', 'TECPR2',
// 'ZNF302', 'CUX1', 'MOB2', 'CYTH2', 'SEC22C', 'EIF4E3', 'ROBO2',
// 'ADAMTS9-AS2', 'CXXC1', 'LINC01314', 'ATF7',
// inst_lib = 'GO_Biological_Process_2018'
inst_lib = 'KEGG_2015'
JSON.parse(fetch_enrichment.body)[inst_lib].map(x => x[1])
// options = ({
// list: gene_list.join('\n'),
// description: 'Clustergrammer gene-cluster list' ,
// popup: true
// })
// function send_to_Enrichr(options) { // http://amp.pharm.mssm.edu/Enrichr/#help
// var defaultOptions = {
// description: "",
// popup: false
// };
// if (typeof options.description == 'undefined')
// options.description = defaultOptions.description;
// if (typeof options.popup == 'undefined')
// options.popup = defaultOptions.popup;
// if (typeof options.list == 'undefined')
// alert('No genes defined.');
// var form = document.createElement('form');
// form.setAttribute('method', 'post');
// form.setAttribute('action', 'https://amp.pharm.mssm.edu/Enrichr/enrich');
// if (options.popup)
// form.setAttribute('target', '_blank');
// form.setAttribute('enctype', 'multipart/form-data');
// var listField = document.createElement('input');
// listField.setAttribute('type', 'hidden');
// listField.setAttribute('name', 'list');
// listField.setAttribute('value', options.list);
// form.appendChild(listField);
// var descField = document.createElement('input');
// descField.setAttribute('type', 'hidden');
// descField.setAttribute('name', 'description');
// descField.setAttribute('value', options.description);
// form.appendChild(descField);
// document.body.appendChild(form);
// form.submit();
// document.body.removeChild(form);
// }
// send_to_Enrichr(options)
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